| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3510 |
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| Symbol | |
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| ID | 4922962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4197850 |
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| End bp | 4198671 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165132 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001095635 |
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| Protein GI | 127514438 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.124246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGTC AGGTCGTCGC CAAACGCCTG ACCGGCATCG CCTATATTCC TCGCTGGCTG
GGCGGGGTGA GCTGCTATAT CGCCTTCGGT TTGGGAGGCC TGCTCAGCTC ACTCACCATA
TTGCCGGTGC TGAGGTTCTG GCCCGGCAGC CAGCAGGTGC GCATCGCCCG GGTGCAGCGC
GCTGTGCACC TGATGTTTCG TGGCTTCGTG CGTATGCTCA CCTGGGCCGG GGTGATTCGG
GTGACCACCC AAGATCTGCA ACGGCTGGAA AGTGCCAAGG GCAAGGTGAT CATCGCCAAC
CATCCGACCC TGGTCGACGT GGTGGTGCTG ATCAGCCTGA TGCCCAATGT CGGCTGTATC
GTCAAGCAGG GACTATGGCG TAACCCCTTC CTGCGGGGCG TGGTCTCCTG CGCCGGTTAT
ATTCCCAACC GCGGCGCCGA TCTCCTCCTC AAGGATTGCA GCGAGGTGCT GGCCCAAGGC
ACTAACATGA TCATCTTTCC CGAGGGCACA CGTACCGTTA AGGGCGAGAT AGTTAACGAA
TTTGCAAGGG GCGCAGCCAA TATCGCCCTG CGCACAAACA TAGACCTGAT CCCCGTGGTA
TTAAGAACCA ATGCCGTCGG CCTGACCAAG CAGGAACCCT GGTATGAGAT ACCTCGCCAA
ACCATAGGCA TGAATGTCGA AGTAGGCGAA ACTATCGAGC ATATCAGGTA TCATGCTCAA
ACGGGTGGAG ACGCCAAGAT GGCCCGTCAG TTGACGCGGG ATCTCGAAGA ATATTATAAA
CAACAACTTG ATAAAAATTA TGAGCTTACA AAACGAAATT AA
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| Protein sequence | MTSQVVAKRL TGIAYIPRWL GGVSCYIAFG LGGLLSSLTI LPVLRFWPGS QQVRIARVQR
AVHLMFRGFV RMLTWAGVIR VTTQDLQRLE SAKGKVIIAN HPTLVDVVVL ISLMPNVGCI
VKQGLWRNPF LRGVVSCAGY IPNRGADLLL KDCSEVLAQG TNMIIFPEGT RTVKGEIVNE
FARGAANIAL RTNIDLIPVV LRTNAVGLTK QEPWYEIPRQ TIGMNVEVGE TIEHIRYHAQ
TGGDAKMARQ LTRDLEEYYK QQLDKNYELT KRN
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