Gene Shew_3495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3495 
Symbol 
ID4923047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4181204 
End bp4182148 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content56% 
IMG OID640165117 
Producthypothetical protein 
Protein accessionYP_001095620 
Protein GI127514423 
COG category[R] General function prediction only 
COG ID[COG2068] Uncharacterized MobA-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATGA AGTTAACTGA TGCAGTGTCC AATGGGGATG ATAACAATCC ATCCTTGACC 
CTAGTGATCA TGGCGGCGGG CCTGGGAAGC CGTTTCGGCG GCGACAAGCA GCTCGCCGAG
CTAGGGCCCA AGGGCGAGAC CATGTTGCAG CTGTCGATCG CCAGCGCCAT CGAGGCAGGC
TTCTCAGCGG CCGTGATAGT GACCCGCGCC GAGCTGATCC CGAGTATTCA GGCGCGCCTG
GCAGGCTTGC CGCCTCAATT TGCGCTGCAT TTCTGTGTGC AGCAGCTGAC AGACCTACCT
GTACCAAGTG GCGAATCTGC GAACGGCACT ATTCTCGAAG CACTGACAAG CAATAGAACT
AAGCCCTGGG GCACGGCTCA TGCGCTGTGG AGTGCTCGTA AATTTGTATC CGGTCCCATG
GCGGTGATCA ATGCCGACGA TTACTATGGC GATCAGGCCT TCGCCCTGCT GGCTCAAGGC
TTTAAGCTGC GGCCGAATCG GTGGCAGATG GTGGCCTATC CTCTCAAGGA GACGCTGTCG
GATCATGGCG GCGTCAATCG TGGCATTTGT GTTACCCAGG ATAATCTGCT GATTTCTGTC
GAAGAGTGGC TGAATATTGC CTGGCAAGGT GATAATCTGG TGGGCTCGCA TCAGGGACGA
CAGAGCAATT TGGCCCTCGA GGCGATGGCC TCGATGACCT GTTGGGGCTT TACCCCGGAT
ATCTTCGATC TCCTGGGCGA GGCCTTGGCA GAATTTGTGA CCCAGCAGGG GAATAAGCCG
GACAGCGAAT GTTACCTTCC CGCCGTGGTG CAAGCCGCCT TAACCGATGA GGCGCAGGCT
AAACAGGTAT TTGTGAGCCA AACCCCGGAT ACCTGGTTAG GGGTGACCTA TCCGCAAGAT
ATTGATTGGG TAAAACAAAA ATTAATGGAG TTACTGGGTG ATTGA
 
Protein sequence
MSMKLTDAVS NGDDNNPSLT LVIMAAGLGS RFGGDKQLAE LGPKGETMLQ LSIASAIEAG 
FSAAVIVTRA ELIPSIQARL AGLPPQFALH FCVQQLTDLP VPSGESANGT ILEALTSNRT
KPWGTAHALW SARKFVSGPM AVINADDYYG DQAFALLAQG FKLRPNRWQM VAYPLKETLS
DHGGVNRGIC VTQDNLLISV EEWLNIAWQG DNLVGSHQGR QSNLALEAMA SMTCWGFTPD
IFDLLGEALA EFVTQQGNKP DSECYLPAVV QAALTDEAQA KQVFVSQTPD TWLGVTYPQD
IDWVKQKLME LLGD