| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3490 |
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| Symbol | |
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| ID | 4923168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4175634 |
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| End bp | 4175864 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640165112 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001095615 |
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| Protein GI | 127514418 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.23046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGTGA TTTTGAGCCG TTTCGGACAA AGACTAAAAC AAATACGAAC TCAACAAAGA
TTAAGCCAAG AACAGCTAGC TGAAATCTGC GAACTAGATC GAACATATAT CAGTGGTATA
GAACGTGGCG TTCGTAATGT TGCACTAATT AATATCGTAA AATTAGCCAA TGGTTTAAAG
GTAAGCGCCT CATCTCTACT TGAATTTGAT GTTGAGACCA AACATGACTA G
|
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| Protein sequence | MNVILSRFGQ RLKQIRTQQR LSQEQLAEIC ELDRTYISGI ERGVRNVALI NIVKLANGLK
VSASSLLEFD VETKHD
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