Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3490 |
Symbol | |
ID | 4923168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 4175634 |
End bp | 4175864 |
Gene Length | 231 bp |
Protein Length | 76 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640165112 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001095615 |
Protein GI | 127514418 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.23046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTGA TTTTGAGCCG TTTCGGACAA AGACTAAAAC AAATACGAAC TCAACAAAGA TTAAGCCAAG AACAGCTAGC TGAAATCTGC GAACTAGATC GAACATATAT CAGTGGTATA GAACGTGGCG TTCGTAATGT TGCACTAATT AATATCGTAA AATTAGCCAA TGGTTTAAAG GTAAGCGCCT CATCTCTACT TGAATTTGAT GTTGAGACCA AACATGACTA G
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Protein sequence | MNVILSRFGQ RLKQIRTQQR LSQEQLAEIC ELDRTYISGI ERGVRNVALI NIVKLANGLK VSASSLLEFD VETKHD
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