| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3464 |
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| Symbol | |
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| ID | 4923389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4147386 |
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| End bp | 4148513 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165086 |
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| Product | ferredoxin |
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| Protein accession | YP_001095589 |
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| Protein GI | 127514392 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.24806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGACTTA GCATAATTAG CGCAAGAAGT TTACATCGCA TCCTGGGGCT CATCGTCGGT
GCCCAGCTTC TCATCTGGAC CCTAACCGGA CTGGCCTTTA ACCTGATCGA CGATCAGCTA
TTAGATGCCA ATGTCATGCG CACCAAGCCT GGCAAAGAAC AGCAAAACAG CGTCAGGTTA
ATTCAACCGA CAGTGACATT GGCAGAGATA ATGGCAGAAA TGACAAACCA ACAGACAAAC
AGTGCCTATC AGCAAATAGA CCTGAAACGC GTCGAGCTCG CCGCGCTGCT GGAGCGCCCG
GTCTATCGCC TGAGGACGAG CGCCGGCACC CTCGCCTTTT GGGGCGATAC CGGCGAGGCG
GTGAACCTGG ATAACGAGCA GCTGATACGG CTCGCCCGGC AGAGTTATTT AGGGGAGGTC
AGGCTCTCCT CTCCCATTGT CGATAAAGAA GCAGCGCAGC GCTATGGCGG CAACCCGGCC
TTCTATCGTT TCGATACCCA GGATAAGCTA GGCACACAGA TCTTCATCGA CGGCCAGAGC
GGTCAGGTCA AGGCCCACGA AAACCAGGGC TCGCGATTCA AGCAGCTGCT CTTCATGCTG
CACTTTATCG ACTATTTCCC GAATAATGGC GTGAGCTTCA ATCACCTGGC GACCCAGCTG
ATTGCCTTCG CCGCCCTGCT GCTCGGTCTC AGTGGCGCCT GGGTACTGGT GCGCAAACTG
GCCGCCGGTG ACTACTTCAG CTGGCAGGTA AATAGAAGCG CAGACAAGGG TAAGCGGCAA
TTAACCTTAC TCTCCCCGGA CGGTGAGCCG CTCGAAAGCC TCATACTGGC GCCGGGCAAT
CTGCTAGATA ATCTTAACCA CGACAGAACC CGCATCCCCA GCCAGTGTGG CGGTGGTGGT
CAGTGCGGCA TGTGCCGCGT CCGCTTCCTG GAGCAGGCGC CGCAGGCGAC CGTCGAAGAG
CAAACTCGCC TCAAGCAGGA ACATTTAGCC CTGGGCATTC GCCTCAGCTG TCAGCATAAT
TGCCACCAAG GCAAGATAGC GCTCACCAGC CGCGCGCAGC TAAGGTTCTG GCAGAAGGCA
CAGAGTGATG CCGAGCAGGC AGTGCGTCCG GCTCAGGCCT CCTCGTAA
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| Protein sequence | MRLSIISARS LHRILGLIVG AQLLIWTLTG LAFNLIDDQL LDANVMRTKP GKEQQNSVRL
IQPTVTLAEI MAEMTNQQTN SAYQQIDLKR VELAALLERP VYRLRTSAGT LAFWGDTGEA
VNLDNEQLIR LARQSYLGEV RLSSPIVDKE AAQRYGGNPA FYRFDTQDKL GTQIFIDGQS
GQVKAHENQG SRFKQLLFML HFIDYFPNNG VSFNHLATQL IAFAALLLGL SGAWVLVRKL
AAGDYFSWQV NRSADKGKRQ LTLLSPDGEP LESLILAPGN LLDNLNHDRT RIPSQCGGGG
QCGMCRVRFL EQAPQATVEE QTRLKQEHLA LGIRLSCQHN CHQGKIALTS RAQLRFWQKA
QSDAEQAVRP AQASS
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