| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3463 |
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| Symbol | |
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| ID | 4923388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4146679 |
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| End bp | 4147389 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640165085 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001095588 |
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| Protein GI | 127514391 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.234764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACAC CCAAACAGAG CCGCTGGCTT CGAAAATCAC ACAAATGGTT GACCCTGTTC
ATGGGGGCAC AACTCCTCAT CTGGTTAATT TCCGGCCTTT ATATGGTGAT CATGGATATC
GACTATATCC ATGGCGATCA TCTCGTTGAC GAGTCCAGGC TCACGCTGGA CGCTAGTCAG
CTAACCATAT CGCCCGAGGC GATCCTCTCA CGCTATCCCG AGGCCAATAG ACTAGAGCTA
CTCCCTACAG CCCTTGGCCC TGTCTATAAA CTCAGGCTCG ACGGCAAACC TCTCTATCTC
TCTGGCCAAG ATGGCGAGCC GCTCGAGCCG CTAAACCAAC AGGATGCGAT GCGGCTTGCT
GGCTTGCTTC ATCCCGGCGA CCTATCAAAC GCCAGCAGTG AGCTGTTAAC CGAATCGGCA
CCGGCCGAGA TAGGTGGGCG TCACCTGCCC CTGTGGCAGA TAAACCTTAA CGATGCCTTC
GACTCACGCC TCTACATCTC GGCCAGCAGC GGCGAGTTAG TGGCCAAGCG CCACGACTTC
TGGCGCCTGT TCGACTTCAT GTGGATGCTG CACATCATGG ACTATGACAC AAGGGAAGAT
GTGCACAATC CGCTGCTGAC CGGCTTTAGT CTGCTGGCGC TACTGACGGC GCTTTCCGGC
GCCCTGCTAC TGCTCATCGC CTTTAAACGG GGCGAGGAGG AGCCAGCATG A
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| Protein sequence | MLTPKQSRWL RKSHKWLTLF MGAQLLIWLI SGLYMVIMDI DYIHGDHLVD ESRLTLDASQ
LTISPEAILS RYPEANRLEL LPTALGPVYK LRLDGKPLYL SGQDGEPLEP LNQQDAMRLA
GLLHPGDLSN ASSELLTESA PAEIGGRHLP LWQINLNDAF DSRLYISASS GELVAKRHDF
WRLFDFMWML HIMDYDTRED VHNPLLTGFS LLALLTALSG ALLLLIAFKR GEEEPA
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