| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3418 |
|---|
| Symbol | |
|---|
| ID | 4923572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4073913 |
|---|
| End bp | 4074641 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640165030 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095543 |
|---|
| Protein GI | 127514346 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC AACAGCGCAA GAATGGCCTC CCCTTAACGG CGGCGGCACT CACTGTAGGG
TTGATGCTCA GCGCCTGCTC AGACAACGAC CATGATACGA ATATGCCAGA GCCACCGGCA
CCACCCGTGG AGCGTAGCTT TACCCTGACG GTGACCAACC TGACGGCGAA TCAACCTATG
TCGCCCCTGG CCCTGCTGGC AACCTCCAAC GGCTATCATG CCTGGCAAAA CGGCGAGCCC
GCCAGCCTGG CGCTGGAGCA GCTGGCCGAG GGCGGCGATC AGTCGGGATA TAACGCCGAG
ATGGACGGCA TCGATATGGT CGTTAGCGGC GCCGGCATAC TCCCTCCTGG GGCGAGTGAA
AGCCTGACCC TGACCCAAAC CGAGGCGGCA ACTGCCTCCC TGTCACTACT GACCATGCTG
GTCAACACCA ACGACGCCTT CAGCGGCCTT AACGCCATTG ATATCAGTCA GATGGCAATG
GATGAAACCC AGAGCTTCTA CACGCCCGCC TATGATGCCG GCACGGAGGC CAACAGCGAA
ATCAAGGGAA GCATCCCTGG GCCGGCGGAT GGCGGTGAAG GCTTTAATGC GGCCCGCGAT
GATGTGGATC GTGTGCATCT ACATCCTGGG GTGATCAGCC AGGACGATGG CCTGAGCGAC
TCTGTGCTCA AAGCCAGTCA TAGGTTCGAC AACCCTGTGC TCAAGGTAAC CATTCAGCGC
ACTCGCTAG
|
|---|
| Protein sequence | MKLQQRKNGL PLTAAALTVG LMLSACSDND HDTNMPEPPA PPVERSFTLT VTNLTANQPM
SPLALLATSN GYHAWQNGEP ASLALEQLAE GGDQSGYNAE MDGIDMVVSG AGILPPGASE
SLTLTQTEAA TASLSLLTML VNTNDAFSGL NAIDISQMAM DETQSFYTPA YDAGTEANSE
IKGSIPGPAD GGEGFNAARD DVDRVHLHPG VISQDDGLSD SVLKASHRFD NPVLKVTIQR
TR
|
|---|
| |