| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3409 |
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| Symbol | |
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| ID | 4923563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4059737 |
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| End bp | 4060768 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165021 |
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| Product | putative lipoprotein |
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| Protein accession | YP_001095534 |
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| Protein GI | 127514337 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTATT CAAAATCGAT TATCGCCATA GCACTCACCA GCCTACTCGC CGCCTGTGGT
GGCAGCGATG ACACACCTGA AACCCCTAAG ACGGGTGTCT TCAGCCTGGG AGTATCGGAC
AACCCTGCCG ACGCTAAAGT CGTGAATATC GCCTTCAAAC AGGTCGTACT CAAAGGTAGC
GATGGCTCCC TATCATTCGA CGTCTCAGAA AACGGCGAGC TGAAACACGT TGACCTGCTG
ACGGTACAAG GCCAGGAGGT CGAGACGCTG GTGAGCGGCC AGTCTATTCC GGTCGGCGAG
TACCAGATGT GTATTTACAT GCAAAACAGC GAAGTGGCCG ACACCAACAG CTCTTACGTG
AAAACCATGG ATGACATGGA CGCGGGTCTG GTCACCAACA GCAATGGTAG CTGTGGCGGC
GTAGGCGCCG AAGAGGAAGG CACGGGTCGT CTCTTCTTCA ACAAGGCCTT CACTATCGCG
GCCGGCGTGA ACAACTTCGT CGCCGAGTTT AACCTCTCTC AAGGCCTGCA GGCACCCCAC
GGCAACAAGG ACTACTGGAC CCTTAAGCCA ACGTCGGTAC AGCTGGTCAA CAACGCCGAA
GTCGGCGCCA TTCACGGCAT GGTCGACGCC AGCGTGATGG CAGACTGTGA AGCCGCCGCC
GGTGGTTCAG AGTTCAGCCC GGCCGTCTAC CTCTACCCAA CGGCGACCGC ACTTGAGAAC
ATGCAGGACT TCCGCCTAGA GGCCGACATC ACCGAGCCGC AAGTGGCACC TATCGCCTCG
GCCCGCGTCA ACCCAGTCAC CGACGAGACA GAAACCGTGG TGGGTTACGA GTATGAGTTT
GGCTTCGTCG CCGCCGCCAA CTACAGCCTG GGCTACACCT GTCTGGCACA GAATGACGAT
CCAGAAGTGG CCAACGGCGC AGATGACGTC GACGCGCCTT TCTTCATCCA TGCCGATGAG
CAGGACGTGA CCGTTACCCA AGGCACCACC ACAGAGCGTG ACTTCGACGC TGCCGAAGTA
CCCGCGCCAT AA
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| Protein sequence | MKYSKSIIAI ALTSLLAACG GSDDTPETPK TGVFSLGVSD NPADAKVVNI AFKQVVLKGS
DGSLSFDVSE NGELKHVDLL TVQGQEVETL VSGQSIPVGE YQMCIYMQNS EVADTNSSYV
KTMDDMDAGL VTNSNGSCGG VGAEEEGTGR LFFNKAFTIA AGVNNFVAEF NLSQGLQAPH
GNKDYWTLKP TSVQLVNNAE VGAIHGMVDA SVMADCEAAA GGSEFSPAVY LYPTATALEN
MQDFRLEADI TEPQVAPIAS ARVNPVTDET ETVVGYEYEF GFVAAANYSL GYTCLAQNDD
PEVANGADDV DAPFFIHADE QDVTVTQGTT TERDFDAAEV PAP
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