| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3403 |
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| Symbol | |
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| ID | 4923706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4053390 |
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| End bp | 4054208 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640165015 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001095528 |
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| Protein GI | 127514331 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.257748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCA TTCTCGCCGT CGCCATCAAA GAGTTTCAAG ACGGGCTACG TAACCGCTGG
CTGATCTCCA TCACCCTCAT CTTCGCCGTG CTCTCCCTGG GACTCAGCTA CTATGGCTCG
GTCGCCTCGG GGCAGTTGGG CACGGCATCG CTGTCGTCCA CCATCGCCAG CCTGTCGAGC
CTGGCGGTGT TTCTGATCCC GCTGATCGCC TTGCTGCTGG CCTACGACAG CTTCGTCGGC
GAGCAGGAGG CCGGCACCCT GCTCTTGCTG CTCACCTACC CCATCAGCCA CACCCAGCTC
TTGCTGGGCA AGTTTGTCGG CCAGGGCGCC ATCATGGCAC TGGCCACCAG CCTGGGCTTC
GGTAGCGCCG CGCTGCTACT GGCCAGCCAG TCCGACGCCA GCGCCGTGCT GCAGAGCTTC
GGCCTCTTCA TCGCCACGGC CATCTTGCTC GGCCTCTGCT TCATCAGCAT CGCCTATGTG
ATCAGCCTGT CGGTGAGTGA GAAGTCCAAG GCCGCCGGGC TGGCGCTGAT GCTCTGGTTC
TTCTTCGTAT TGGTGTTCGA CCTCGCCCTG CTGGCGGTTT TGGTGGGCAT AGAGGAGGGG
CTGAGTCAGC AACAGCTGGT GCAGCTGATG ATGCTCAATC CGGCGGATCT CTTCCGTCTG
GTGAATCTGG CCAGCCTGGA TACCAAGGAT ATCAACGGTG TGCTGGCGGT GGCCATCAAC
AGCAGCATGT CGGCCGGCAG TCTATTCTCA CTGCTACTGG CCTGGGTATT CGCCCCGCTC
TCTTTAGCCG CCCTCATCTT TAACAGGAAG ACACTCTAA
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| Protein sequence | MNAILAVAIK EFQDGLRNRW LISITLIFAV LSLGLSYYGS VASGQLGTAS LSSTIASLSS
LAVFLIPLIA LLLAYDSFVG EQEAGTLLLL LTYPISHTQL LLGKFVGQGA IMALATSLGF
GSAALLLASQ SDASAVLQSF GLFIATAILL GLCFISIAYV ISLSVSEKSK AAGLALMLWF
FFVLVFDLAL LAVLVGIEEG LSQQQLVQLM MLNPADLFRL VNLASLDTKD INGVLAVAIN
SSMSAGSLFS LLLAWVFAPL SLAALIFNRK TL
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