Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3397 |
Symbol | |
ID | 4923700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4045361 |
End bp | 4045831 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640165009 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001095522 |
Protein GI | 127514325 |
COG category | [R] General function prediction only |
COG ID | [COG2153] Predicted acyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00567056 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGG GGATAGCAGT GCGTTGGGAG AGTGTGGCGT TTACCGAACT GAGCCTTGAG CGGCTCTACG AGCTGTTGAA GTTAAGGGTC GATGTATTTG TGGTGGAGCA GGTCTGTGCC TATCCCGAGC TGGATGGCAA AGACACCCTG GCCGAGACCC GTCATCTGTT AGGTCTGGAT GAGCAGGGGC GGATAGCCGC CTATGCGAGG ATCTTGGCCC CCGGGGTGAG TTACCCCCAA GCCAGCATCG GCAGGGTCAT CGTCGCGCCA TCGGCTCGCG GTGCGGGCGT CGCCAAGCCC TTGATGCTTG AGGCGATTGC CATCGCCAGA CAGAACTGGC CAGCCCAGGG CGTTCAGATC GGCGCCCAGG AATACCTTAA GGGTTTCTAT CAAGGGGTGG GTTTTCGACC CGTGTCTGAG GTCTATCTGG AGGATGGTAT TCCCCATCTC GACATGTTGC TGGGTGCCTG A
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Protein sequence | MNEGIAVRWE SVAFTELSLE RLYELLKLRV DVFVVEQVCA YPELDGKDTL AETRHLLGLD EQGRIAAYAR ILAPGVSYPQ ASIGRVIVAP SARGAGVAKP LMLEAIAIAR QNWPAQGVQI GAQEYLKGFY QGVGFRPVSE VYLEDGIPHL DMLLGA
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