Gene Shew_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3397 
Symbol 
ID4923700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4045361 
End bp4045831 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content59% 
IMG OID640165009 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001095522 
Protein GI127514325 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00567056 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAGG GGATAGCAGT GCGTTGGGAG AGTGTGGCGT TTACCGAACT GAGCCTTGAG 
CGGCTCTACG AGCTGTTGAA GTTAAGGGTC GATGTATTTG TGGTGGAGCA GGTCTGTGCC
TATCCCGAGC TGGATGGCAA AGACACCCTG GCCGAGACCC GTCATCTGTT AGGTCTGGAT
GAGCAGGGGC GGATAGCCGC CTATGCGAGG ATCTTGGCCC CCGGGGTGAG TTACCCCCAA
GCCAGCATCG GCAGGGTCAT CGTCGCGCCA TCGGCTCGCG GTGCGGGCGT CGCCAAGCCC
TTGATGCTTG AGGCGATTGC CATCGCCAGA CAGAACTGGC CAGCCCAGGG CGTTCAGATC
GGCGCCCAGG AATACCTTAA GGGTTTCTAT CAAGGGGTGG GTTTTCGACC CGTGTCTGAG
GTCTATCTGG AGGATGGTAT TCCCCATCTC GACATGTTGC TGGGTGCCTG A
 
Protein sequence
MNEGIAVRWE SVAFTELSLE RLYELLKLRV DVFVVEQVCA YPELDGKDTL AETRHLLGLD 
EQGRIAAYAR ILAPGVSYPQ ASIGRVIVAP SARGAGVAKP LMLEAIAIAR QNWPAQGVQI
GAQEYLKGFY QGVGFRPVSE VYLEDGIPHL DMLLGA