| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3395 |
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| Symbol | |
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| ID | 4923698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4043855 |
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| End bp | 4044733 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640165007 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001095520 |
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| Protein GI | 127514323 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00495336 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAATT ATATCGAACC GTTATTTCGG CCGCCTTCCG AGTGGAAGTC CCTCATACTC
CAGGTAACCA ATGGTTGTAG CTGGAATCGC TGCCATTTTT GCGACATGTA TACCGCGCCG
CAGAAGCAAT TTCGTGCACA AAAAATAGAT AAAATTGCAG AGGATATTCA ACGGGTCGCC
CAGCGAAACC TGTCGATCTC ACGGGTATTC CTCGCCGATG GTGATGCCAT GAGCCTGCCC
TTTAACCGCC TGGAGGCCAT CTGTCTGTTG ATCCGTGAGC ATCTGCCCCA GGTGACCCGC
ATCAGTAGCT ACTGTCTGCC GCGCAATCTC AATAATAAGA CGGATGCGCA GCTCGCCCGG
CTCAGAGAGC TGGGGCTTAG TCTGCTGTAT GTGGGCTGCG AGAGTGGGGA CGATGAGGTG
CTGGCCCGTA TCGAGAAGGG CGAGACTTTC GACTCCTCCT TGCTGGCCTT GCAGCGCATA
CGCGCGGCCG GCATGAAGTC ATCCGTGATG ATACTCAATG GCTTGGGGGG CGTGGAGCTG
TCCAGGCAAC ATGCGCTCAA CTCGGCGCGC CTGATGAATG AGGCGCAGCC CGACTATCTG
TCGACCCTAG TAGTGACTCT GCCCCTCGGC AAGGCGCGCA TGGACGCCGG ATTCGACGGA
GATTTTAAAC TGCCGGACCA GCATGGCCTG CTGAGCGAGA TGCAGCTGCT GCTGGGTGAA
CTCGAGCTTG AGAAGACCAT ATTCAGGTCA GATCACGCCT CTAACTATCT GGCGCTCAAG
GGGATACTGG GCCGTGACAA GCAGAGCCTG TTGACCCAGG TTGAGCAGGC GATTCAGGGA
CTGGTGCCCC TGCGCCAGGA GTGGCAGCGC GGCCTCTAG
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| Protein sequence | MINYIEPLFR PPSEWKSLIL QVTNGCSWNR CHFCDMYTAP QKQFRAQKID KIAEDIQRVA
QRNLSISRVF LADGDAMSLP FNRLEAICLL IREHLPQVTR ISSYCLPRNL NNKTDAQLAR
LRELGLSLLY VGCESGDDEV LARIEKGETF DSSLLALQRI RAAGMKSSVM ILNGLGGVEL
SRQHALNSAR LMNEAQPDYL STLVVTLPLG KARMDAGFDG DFKLPDQHGL LSEMQLLLGE
LELEKTIFRS DHASNYLALK GILGRDKQSL LTQVEQAIQG LVPLRQEWQR GL
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