| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3349 |
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| Symbol | |
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| ID | 4922190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3994343 |
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| End bp | 3994921 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164961 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_001095474 |
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| Protein GI | 127514277 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0250547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACTC AAGAGATGGC GTTGATCACC CGCGACGAAC TACTTTTGCC CGACGGCAGA
ATAGAGATAC GAGTGGCGGG GCCTAGCAGC TTGAAACTGA TTGCCGAGGT GCTCAAGGGG
CACTTCCCCC TGGCCTTTGC CATGTCACGG CCTCAGGCCA ATCCCCCCTG TTATCCGCTG
GCGACTCAGT GCGAGATCAT AGACTTTAAT CAGCTCGAAG ACGATTGTTT AGGCCTGGTG
CTGGAAGGCA AGCAGAGGGT GAAGATCTTC TCGGCGGCCA AGCGACGCGA TGGTAACTGG
ATCGCCAGGA CGCTCAGCTG TAACAATTGG CGTGAAGAGC CTATAAAGGG CGAATTTGAG
CTGATCAGTG CGGCGTTGGA GCAGTTCTAT CTGGTCAATC CAGCCTTGCA GGAGCTATAT
GCGGATCTGC ACTTGGAAGA TGCCACCTGG GTCAGCCAGC GTTGGCTCGA GGTGCTGCCC
CTGTATAATC GTGATAAGCA GGTGCTGGTC AATCAGCCCG ACTGTCACAA GACGATGGAT
TTTGTACTCG AATTGATCAA GTCCCACGCC GGGCAATAA
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| Protein sequence | MLTQEMALIT RDELLLPDGR IEIRVAGPSS LKLIAEVLKG HFPLAFAMSR PQANPPCYPL
ATQCEIIDFN QLEDDCLGLV LEGKQRVKIF SAAKRRDGNW IARTLSCNNW REEPIKGEFE
LISAALEQFY LVNPALQELY ADLHLEDATW VSQRWLEVLP LYNRDKQVLV NQPDCHKTMD
FVLELIKSHA GQ
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