| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3332 |
|---|
| Symbol | |
|---|
| ID | 4924042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 3976771 |
|---|
| End bp | 3977223 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640164944 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095457 |
|---|
| Protein GI | 127514260 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTC GTTTCTGCTT ATTTGTGTTG CTTTGTAGCT GGTTCGCTGT CGCCCAGGCT
AGCGAGCTGA TGGTACACGA CGCCTGGATC CGCGGCATGC CGCCCACCTC TCGTGTAGTG
CCCGTCTACC TTTCCCTACA TAACCCCAGC GACAAGCCCT TGGTGCTCAA GGCTATCACT
AGTCCTCGTG GTGTGGTGGA GCTGCATCAG ACGCTGATGG AGAACGAGGT GATGCGCATG
CAAGGAGTGG AGGCGATACA GATCCCGCCC CATGGCATGG TGAAATTGGC GCCCGGTGGC
TATCACGGCA TGATGTCGGA CTTTAAGACC GGCGTGCCGG CTTTGGGGGA AGAGGTGGCG
TTGACACTTA CCCTGGCGGA TGGCGAGACC CTGTCGGTGA TGGCCAAAGT CACGGCTCAG
GGAGAGGCTC ACGACCACAG CATGCACCAC TAA
|
|---|
| Protein sequence | MKGRFCLFVL LCSWFAVAQA SELMVHDAWI RGMPPTSRVV PVYLSLHNPS DKPLVLKAIT
SPRGVVELHQ TLMENEVMRM QGVEAIQIPP HGMVKLAPGG YHGMMSDFKT GVPALGEEVA
LTLTLADGET LSVMAKVTAQ GEAHDHSMHH
|
|---|
| |