| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3328 |
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| Symbol | |
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| ID | 4924038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3969688 |
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| End bp | 3972324 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640164940 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_001095453 |
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| Protein GI | 127514256 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATAG GCTGCTTGCT TATACTCGCC TCGCAACTCA GCGCCTGTGG CGGTGGAAGC
GGCTCATCAG AAACAGATAA AACCGCGGTC AAACTCAACC AAACACTCAG CTTTAGTCAA
GGTGGCACCA TAGAGAAAAC CTTCGGTGAT GAGGCTTTTA GCAACTCGCT TCAAGGTTTT
TTAGGAACTG GAGCCATAAG TTATACCAGC TCTAACCCAG AAGTCGTCAC CGTCTCCAAT
GATGGTTTGG TCGCGATATT AACCGCGGGT TCCAGCACTA TTACCGCTCA TATCGCCGAA
GATGCCAAGT ACCTGGCAGC CTCCGCCGCC TATCAAGTCA ATGTCGCCAA GGCGGAGAGA
GCAATCGCCT TTGAGAACAC AGGCACAGTG GCGCTCTTTA TCGATCAAAC TTATCTCAAT
CCCGTCAATG TCGATGTTGC TAACGTCACC TTTAGCAGCC AAGATCCTGC CGTGGCCTCG
GTGGATACCA GTGGACAGGT GACGGCGCAT ACGCCAGGCG AGGCGCAGAT CTTTGCCGAG
ATCGCCGAAA CCGCTAACTA CCTAAAAGCC AGCAGCAGCT TCTTTGCTTC TGTCGCGCCA
AAGTCGCTAA CACTCAAGTT GCTGATAGGA ACCGATGACA CAAAAGTATT TACTGATGTA
GATACTCCTC TGCAACTAGC CAGAACCACT CAGGCCGACT GTGATTTTAA CAATCTCAGC
AACTGCGATA ACGGGCTGGT CGACAAGCTA TCCACACAGC CGCTAAAAGA CAGCAGCTTA
ACAACGACGA GTGATGCCTA CTATAACCTC TTCCACGGCC AACATACTGG TCAGGCAACC
TATGTCGCCA ACAATACCCC TTCTGGCCGC TCTTCAGGCA AGGTCGTTTC TTTCGATGGC
TATCTCTGGC TCATCGGTGG CAATGACTAT ACCGGCAATG ATGCCAGTAT CTGGCGATCG
AGCGATGGCA ACATCTGGCA AAAAGTGGTT GATGAGGCTC CTTTTGGCGT GCGTCCTCCT
GTGGCTGTCA TTACATTTGC AGACCATATC TGGCTCATAG GAAACCGACG TGACACTACG
CTTAACGACG TATGGCGCTC AGCAGATGGC ATCAATTGGA CACAGGTAAA TGCCGATATT
GGCTTTGGCG AACGCAACAA CTATTCGGTG ACGACTTTCA AAAACAAGAT GTGGATATAT
GGCGGCTTTG ATTTGCAGAC TCGCGAGCAT GTCAAAGAGA TCTACTCCTC TACCGATGGC
ATCACCTGGA ACCTGGAATC GTCAGACTCG ACAGCAACCC AGAGAGTAAG CACCGCCTTT
GCTGAATTTA ATGGCAAGCT GTGGCAATTT AGCGGCAGAA ACGATACCGG GAGAGTCGCC
GACATATGGA ACTCAGATGA CGGCATTCAT TGGACATTGG TGACAGACAC ACCAGAATTC
TCGGCTAGAG AAAAGCATGA AGTTAGGCAA GTCGGTAATC AACTAATTTT GCTGGGCGGT
TATATTGATC AGCTCGATCC GAATCGCTCT CAGAATCCAA ACGATGTATG GACCTCCACC
GACGGCGCCT CTTGGACGTT AGCAACAGAT GACGCTAACT TCGGTGTACA ATCGCCATAC
ATGGTCGATA GGATACGCTT GTACTTCACC ACCGCGGTAC ATAATGATGT CCTGGTCGTT
ATCGGCGGCA AAAGTGATAA TGGCGTCTTA CTCAACGACA ACTGGCAAAC GACAGACGGC
AAGCATTGGC TGCCGCTCAA CAATCAGTTG CCATCCATGA AGGATATTCA GGCAGTCAGT
CACCTGGGAG AGATACAACT GCTTTCTGGC ACCAACGAAG ATTTCGAGAA AGTAAATACT
CGTTGGCACT CTGCTGACGG TTTCAGCTGG AAATTAGATG ATTCCACTAC GCTTCCCTTT
CCGACGGACA GCAAACTACT TACTTTTTCT GGTAAAATTT GGGCCTTGCA CGCAAGTGGT
AGCTACTCAT CACTCGATGG TAAATCCTGG ACTCAAGAGG CGCTCACCGG GCCAAATGTT
GGCACGCAAA ACGGTCAATA CTCAGTCTAT CCATTCGACA ATAAATTATG GGCTATCGAC
ACACAAAACG GCGTCGTATA TCGCTCAGAA GATGGCATCA ACTGGACAGA TGTAGGCAAT
AATAATTTCC CCGCACGCGC CGTAACCCAA ATCAGCAGCT TTGGCGGAAA ACTATGGGTG
GTAGCGGGTC ATGAAACCCT ATCTCGAACG ACTCAACTCA GTGATATCTG GTCAACCACA
GATGGTATCA CCTGGACAAA ACAGGCAGAT ACCACTGAGT TCGGCGCGAG ACATATACAC
CAGCTCGTCG AGTTTGACGG TAAATTGTGG GCCTTTGGCG GATATGGCGC TAACCAAACC
TTAACCGATC TCTGGTATTC CCAAGATGGC ACCAACTGGA CCAAGGCCAT GGATAATTTC
TCCTTCGATG CTAAGCGTGG TTATCGCGCC ATGGTTCACG GCGGTCAACT CTTCGTTTTG
GGTGGGATAA TGCCCTATCC CTTAGATGCC ACCAATCAAA CCACCGCCAA CCAAGTCTGG
ATGACGACTA ACGGCACTGA ATGGCGCCGA GCGTTACAGC AAACGCTGAG TTTCTAA
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| Protein sequence | MRIGCLLILA SQLSACGGGS GSSETDKTAV KLNQTLSFSQ GGTIEKTFGD EAFSNSLQGF
LGTGAISYTS SNPEVVTVSN DGLVAILTAG SSTITAHIAE DAKYLAASAA YQVNVAKAER
AIAFENTGTV ALFIDQTYLN PVNVDVANVT FSSQDPAVAS VDTSGQVTAH TPGEAQIFAE
IAETANYLKA SSSFFASVAP KSLTLKLLIG TDDTKVFTDV DTPLQLARTT QADCDFNNLS
NCDNGLVDKL STQPLKDSSL TTTSDAYYNL FHGQHTGQAT YVANNTPSGR SSGKVVSFDG
YLWLIGGNDY TGNDASIWRS SDGNIWQKVV DEAPFGVRPP VAVITFADHI WLIGNRRDTT
LNDVWRSADG INWTQVNADI GFGERNNYSV TTFKNKMWIY GGFDLQTREH VKEIYSSTDG
ITWNLESSDS TATQRVSTAF AEFNGKLWQF SGRNDTGRVA DIWNSDDGIH WTLVTDTPEF
SAREKHEVRQ VGNQLILLGG YIDQLDPNRS QNPNDVWTST DGASWTLATD DANFGVQSPY
MVDRIRLYFT TAVHNDVLVV IGGKSDNGVL LNDNWQTTDG KHWLPLNNQL PSMKDIQAVS
HLGEIQLLSG TNEDFEKVNT RWHSADGFSW KLDDSTTLPF PTDSKLLTFS GKIWALHASG
SYSSLDGKSW TQEALTGPNV GTQNGQYSVY PFDNKLWAID TQNGVVYRSE DGINWTDVGN
NNFPARAVTQ ISSFGGKLWV VAGHETLSRT TQLSDIWSTT DGITWTKQAD TTEFGARHIH
QLVEFDGKLW AFGGYGANQT LTDLWYSQDG TNWTKAMDNF SFDAKRGYRA MVHGGQLFVL
GGIMPYPLDA TNQTTANQVW MTTNGTEWRR ALQQTLSF
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