| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3300 |
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| Symbol | |
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| ID | 4920801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3943802 |
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| End bp | 3944095 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164912 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001095425 |
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| Protein GI | 127514228 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3113] Predicted NTP binding protein (contains STAS domain) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.579881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.128319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCT TTAACCAGGC GGCGGGGCAG TGCCAAGTCA GCGGCGAGCT GTCTCAGGCG
GCTGTGGTGG AGCTCTGGCC TAAGCTGGAG ACGCTACTCG ATGGTGCCTG TGACCGACTG
GATCTTGCCG GCGTCTCCTA TAGCGACAGC GCCGGTGTCG CCCTGCTGCT GCATCTGGTG
GCAGAGCAGC AGAAAAAGGG TCAGTCGCTG GTGCTCTGTA ATCCGCCGGC GCAACTGCAA
AAGTTAATAG ATTTATATGA TTTACAAGAC TTCTTCACCG AAGAAGCCAA ATAA
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| Protein sequence | MLSFNQAAGQ CQVSGELSQA AVVELWPKLE TLLDGACDRL DLAGVSYSDS AGVALLLHLV
AEQQKKGQSL VLCNPPAQLQ KLIDLYDLQD FFTEEAK
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