| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3267 |
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| Symbol | |
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| ID | 4921300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3906111 |
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| End bp | 3907739 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164879 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_001095392 |
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| Protein GI | 127514195 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.389403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00603996 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACCCG CCATCCTCAT CATCACCTTA GCCTGTGGCA TGCTTGTCAG TCGTATCGGT
TTACCACCAC TCATAGGTTA TCTGGTCGCG GGCTTCGTAT TGTTCCTCTT CGGTATCGAC
GAGAGCAGCC TGCCCCTATT GGAACAGCTG GCCGAGCTGG GTGTGACCCT GCTGCTGTTT
GCCATCGGCC TCAAGCTGGA TATTCGTAGC CTGTTTAAGG CCGAGGTGTG GGCGGGATCC
AGCCTGCATC TGATGGGATC TATCATCTTC CTGGTGCCCC TGCTTAAGCT GCTCGGCCTG
CTGGGGCTGG AGCAGCTGAG TGGCCTGGCC TTCAATCAGC TTACCCTGCT GGCCTTCGCG
CTGAGCTTCT CCAGCACCAT CTTCGCCGTC AAGGTGCTCG AAGATAAGGG CGACATGCAG
TCCCTCTATG GCCGCGTCGC TATCGGTATT CTGATCATGC AGGATATCTT CGCCGTCGCC
TTCCTCACCA TATCCAAGGG GGATATCCCC TCCATCTGGG CCCTGGGGCT CCTGCTGCTG
CCCTTCGCTA AGCCGCTCAT CTACAAGGCG TTCGACAAGG TCGGTCACGG CGAGCTCTTG
GTGCTCTTCG GTCTGGTGAT GGCCCTGGTG GTGGGTGCTG GCCTATTCGA ACTGGTCGGC
CTCAAGCCGG ATCTTGGCGC GCTTATCATA GGCATACTGC TGGCGGGTCA CGCCAAGTCG
TCTGAGCTGG CCAAGTCGCT CTTCTACTTC AAAGAACTGT TTCTGGTGGC CTTCTTCCTC
ACGGTCGGTC TCAACGGCCT GCCGAGCTTC GCCGACATCG GTCTGGCGGC CCTCTTGGTG
CTTATCGTCC CAGTGAAGAT AGTGCTCTTC CTCTATCTGC TGACCCACTT CAGGTTGCGT
TCGCGCACCT CCTTGATGAC CTCGTTCAAC CTGGGCAACT ACAGCGAATT TGGCCTGATC
GTCGCCGCCG TGGCCACCAG CAAGGGCTGG CTACCCGGGC AATGGTTGGT GATCCTAGCA
GTAGCCCTCA GCCTCAGCTT TTTGTTTGCC GCGCCGCTTA ACGCCGCCTC GGCTCGCCTG
TATCAGAAGT TTCAAAGTCG CTTGCAGAAG CTGGAAAGAC ACCCGCTACA CCCCGAAGAC
AGACAGATCC CCGTGGGCAA CCCCCGCTTC CTCATCCTGG GGATGGGACG TATCGGTAGC
GGTGCCTACG ACGAGCTGGC CAACCAGTTT GACGGTGAGA TCCTGGGGAT AGAACACAAG
CAAGATCTGG TGGACTTCCA TCGCCAACAG GGCCGCAACG TGGTTCAAGG CGATGCCTCG
GATACCGACT TCTGGGAGAA GCTGGACAGG GCGCCGAATC TCGAGCTGGT GCTGCTGGCC
ATGCCCCACC ACGCGGGTAA CCAGTTTGCG GTGGAGCAAC TAAAACGCTT GGATTATCAG
GGCAAGCTCA GCGCGATCGT GCAATACAGC GAGGATGCCC AGTCCCTCAA GGCCGCCGGG
GTACACAGCG TGTTCAACCT CTACGAGGCC GCCGGCGCCG GTTTTGTCGA GCATGTGGTT
TGCGAGCTCA AGTCCGGCAA GCAGCACGAG GCCGATATCG CCGTCGAGAC TCAGGAGATC
ACAGGCTAG
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| Protein sequence | MEPAILIITL ACGMLVSRIG LPPLIGYLVA GFVLFLFGID ESSLPLLEQL AELGVTLLLF
AIGLKLDIRS LFKAEVWAGS SLHLMGSIIF LVPLLKLLGL LGLEQLSGLA FNQLTLLAFA
LSFSSTIFAV KVLEDKGDMQ SLYGRVAIGI LIMQDIFAVA FLTISKGDIP SIWALGLLLL
PFAKPLIYKA FDKVGHGELL VLFGLVMALV VGAGLFELVG LKPDLGALII GILLAGHAKS
SELAKSLFYF KELFLVAFFL TVGLNGLPSF ADIGLAALLV LIVPVKIVLF LYLLTHFRLR
SRTSLMTSFN LGNYSEFGLI VAAVATSKGW LPGQWLVILA VALSLSFLFA APLNAASARL
YQKFQSRLQK LERHPLHPED RQIPVGNPRF LILGMGRIGS GAYDELANQF DGEILGIEHK
QDLVDFHRQQ GRNVVQGDAS DTDFWEKLDR APNLELVLLA MPHHAGNQFA VEQLKRLDYQ
GKLSAIVQYS EDAQSLKAAG VHSVFNLYEA AGAGFVEHVV CELKSGKQHE ADIAVETQEI
TG
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