| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3263 |
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| Symbol | |
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| ID | 4921296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3900842 |
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| End bp | 3902677 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164875 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_001095388 |
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| Protein GI | 127514191 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.507481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00561071 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCAACA GCCAAGCCCC CAGCCCTGAG CTACAACACT TTTATATCTC CGAAGAGCAG
TCTATCTACC TGCTCAAGGC CGATGACGCC CGCAAACACA GGGCGTGGAT CAGGCTCTGT
AAACAGCAGC TAAGTAAGCT GGGCTACTCA GATATCGAAC TGGTGGGCAA GGGCGCCTAC
GGCTTCGTGT TCGCCGGCAT CAATAGCCAT GGCCAGGCGC ACGTGTTCAA GTTCTCCCGT
ATCACCCTGC CCCAACAGAT CCAGGACAGG CTGGAGGAGG AGGCCTATAT GCTCTCCCAG
GTGATCCACC CTAATGTGCC GCCGGTGATC AAGTTTGAGC ATGTGGGCAA GCAGGGGATA
TTGGTAATGG CCAGGGCGCC GGGGGAAGAT CTCGACAAAC TCTGCCTCAG GCATGGCGCC
CTGCCGGCGC GCATCATAGT CAGTATCGCC CGCCAGCTGG CGCAGATCCT CAACTATCTG
CACAACGGCC GCCCCCTGGT ACATGGCGAC ATCAAGCCCT CTAACCTGGT GTACGACATG
GAGCGGGATC ATCTCTCGCT GATCGACTGG GGCTCGGCGG TATTTGCCCA GCGCGATGGC
GAGGGCAATC CGGTCAACGG CAACGTGATG GATCTGCTCT CCAGTGATCA GCAACACACC
AACGCCCGCA TGGGGGATGT CTATTTCATC GGCGAGGAGC AGCTCAGCGG CGCCCTCTCC
AGCCCCAGGT TCGACGAGCA AGGGGTGGCG GCGACCCTCT ACGCCCTGGC CTCGGGTCAG
GCCAGCCGTT TCGGCAGCAA GGTGATCCCC GCCAGCAGCA TAGGCCTGCC CATAGAACTG
GCCCGCACCC TTGATGGCAT GCTCAGCGAG GATCCCGCCA CCCGTAACCG GGCCGGGGAT
TACTTTCTCA AGAGCATGGC CCATAGCCAT CGTCTGCATC TGCCGGATCT GCCCACGGCG
CCGCTGCAGC CTGAGATCCC AGTATGGACC CTCAAGCAGG CCAAAGATGT TGAGACTGTC
ACCTACAGCT CGCGTAAATC CTTCCTGCGG GAGCACAACG AAGATGAGCC GATAGAGAAG
ATGGACGATC TCCAGCTGGA GAAGTACTAC CGCAACTTCA TGGCGGGCAT GGGAGACACA
GAGAAGGGCT TTATCGCCGC AGTCAGCCGG GTGGGCCAAT ATTCCCTGGT AGGCGGCCTG
GCGATCCACT GGCAGGAGTC CGGGGTGTTT ATCGACTCTA ACCTGGCCAC CTATAACGCC
GAGGAGAAGG CGGCGCTCAT CTTGGCGGTG AACAACATGG TGACCCTGGC GCGGGGCATC
CGCCGTATCG GGGTGTTTAA GGCCTGCTTC TTCAACGCCC GCGACACCCT GCATCTGGAG
CGTGACGACA CCAGCCAACC CTTCAGGCCG AGCCCAGACC AGCAGCTACC CTTTGAAGTG
GGCGATGTGC CTTCGCTGGA GGATAAATCC CGGCTGCACT CCTACTTCGA GGATGGCCGC
GACCCGGATG AAAATCTGGA GCTGCCCAAG GAGATCATGA CTGAGCTTGG CTGGATCAAC
CAGATCCATC ACACCGGCTG CATCATCTTC GAGGTGTTAC CTAACCATAT GAAGATCCAC
AGTTATCTGC GTCTGTTGAA TCCCCGTAAG CAGGCGGCCT TCAGGGCCAG CCTGGACAGG
ATCCTCAGCC ATGTGGATAA GATTCAGGGG AAAGGGGTGT CGGGCTTCAT GAAACTCCCC
TACAAGAACA CCCGCCGTTT TCAACATATC GACAGGAAGA CGGACCACTT CTACCCCAGA
AACCCCAAGG AAGTGATGGC CCAGCTAGAT GAGTAA
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| Protein sequence | MPNSQAPSPE LQHFYISEEQ SIYLLKADDA RKHRAWIRLC KQQLSKLGYS DIELVGKGAY
GFVFAGINSH GQAHVFKFSR ITLPQQIQDR LEEEAYMLSQ VIHPNVPPVI KFEHVGKQGI
LVMARAPGED LDKLCLRHGA LPARIIVSIA RQLAQILNYL HNGRPLVHGD IKPSNLVYDM
ERDHLSLIDW GSAVFAQRDG EGNPVNGNVM DLLSSDQQHT NARMGDVYFI GEEQLSGALS
SPRFDEQGVA ATLYALASGQ ASRFGSKVIP ASSIGLPIEL ARTLDGMLSE DPATRNRAGD
YFLKSMAHSH RLHLPDLPTA PLQPEIPVWT LKQAKDVETV TYSSRKSFLR EHNEDEPIEK
MDDLQLEKYY RNFMAGMGDT EKGFIAAVSR VGQYSLVGGL AIHWQESGVF IDSNLATYNA
EEKAALILAV NNMVTLARGI RRIGVFKACF FNARDTLHLE RDDTSQPFRP SPDQQLPFEV
GDVPSLEDKS RLHSYFEDGR DPDENLELPK EIMTELGWIN QIHHTGCIIF EVLPNHMKIH
SYLRLLNPRK QAAFRASLDR ILSHVDKIQG KGVSGFMKLP YKNTRRFQHI DRKTDHFYPR
NPKEVMAQLD E
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