| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3246 |
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| Symbol | |
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| ID | 4921323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3883355 |
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| End bp | 3884032 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164856 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095371 |
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| Protein GI | 127514174 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.789189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAGA TAATACTCTC CTCTTGCGCC TTAGCCATCG CCTGCACCAT GAGCCAACCA
CTAGCGGCCG AAGAAAGTCA ATTCGCCGCC TCAGGCGTAC TCATGGGCCT CAGCAACTAC
CTATGGCGCG GCCAAACCAT CAGCGACAAC AAGCCCACCC TGCAGGGCGA CCTCATGGTG
GAACATGAAA GCGGCTTCTA TCTGGGGACC TCATTCGAGA CCTATCGATA TGAAGACGAA
GGCAGTATCT ACAACGATTA TGAGATAGAT TACTACGGCG GCTACTACCA GATGGTCACC
GAGGATCTGG GCCTGGGTTT CAATGCCATG AAATACACCT ATGGGGCCGG TGGCTACAGC
GTCGAGTATG CAGTAAGCAT CGACTACAAG GCCCTCAATC TGACGGTGAA CTACGATCAG
GATGTGGAAG CTTGGTATAC CGAGGTTAAC TATGGCTTAG ATCTGTTTAA CGAGAGTCAA
CTGGTCGCGC ACGTGGGCCT GTTTACCGAT GCGGAAAACT ATGGCTATCT CGACAATGGC
AAGGTGGCCG ATAGCATCTA CGATGTTGGA TTGCGCTATC GCTACCCACT GCTATCTCAG
TTGGATCTCA TGCTAGAGGC CAGCTACCAG GAGTTCGAAC ACGACCACTA TATGATAGGT
CTCGCCTACA ACTTCTAG
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| Protein sequence | MNKIILSSCA LAIACTMSQP LAAEESQFAA SGVLMGLSNY LWRGQTISDN KPTLQGDLMV
EHESGFYLGT SFETYRYEDE GSIYNDYEID YYGGYYQMVT EDLGLGFNAM KYTYGAGGYS
VEYAVSIDYK ALNLTVNYDQ DVEAWYTEVN YGLDLFNESQ LVAHVGLFTD AENYGYLDNG
KVADSIYDVG LRYRYPLLSQ LDLMLEASYQ EFEHDHYMIG LAYNF
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