| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3243 |
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| Symbol | |
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| ID | 4921527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3878097 |
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| End bp | 3881171 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164853 |
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| Product | molydopterin dinucleotide-binding region |
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| Protein accession | YP_001095368 |
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| Protein GI | 127514171 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGTA GAGATTTTTT AAAGGCGGGT TCGGTTGCCG CCGTGATGAC AACTGGCGCG
CTGGGCGCCA AGGCCGCAAC AAAGGCGAGC ACGAGCGACG CCGAGATCAG CCGCTATGCC
CCAACCTCGC TGACCCCTGA GTACTATTTT GATCAGGACA AGCAACTGGT GGAAAACCCT
GAGCAGCGTT TCGCCTTCTC CAAGTGTTTC GGTTGCTTTA ACGTCTGCGG TGCTCGGGTC
AGCATAGACA ACAAGACAGA CAAGGTGCTA CGCGCCGTGG GTAATCCCTA TACCCTGACC
AATAACGCAG GCCAGCCCTT TACCATGGAG ACGCCGCCTA AGGAGGCGAT GTTACAACTC
TCCGCCGTCA GCGGCCTGAG CCAAAGCAAT CGCGCTACTC TGTGTGGCCG CGGTAATGCG
GTGCCCGATG CGTTCGAGGA TAAGCACCGT ATCACCCAGT GCCTCAAGCG GGTGGGCAAG
CGAGGTGAGA ATCGCTGGCA GAGCATCTCC TATGAGCAGC TGCTCAAGGA GGTGATTGAG
GGCGGCGATC TGTTTGGCGA GGGCAAGGTC GAGGGGCTGA GGGCGATTCA TGATAATCCT
GCGCTGGCCA ATCCGCGTTA TCCAGATTTC GGTCCGGTGA AGAATCAACT GCTGGTCTCT
ACCTCCTCTG AGCAGGGGGC TCGGGCCGAT TTTTTACACC GCTTCGTCAA GGAGTCCTGG
GGCACACCCA ACATAGGCAA TAAAGACTCC TACTGTGGTC ACCAACAGGT GGCGGGTTGC
GCCCTGGGTT GTTTCGATGC TGTCGACGAG ATGGCCTTGC CTCAGGTGGA CTATGAAGAG
ACCAAGTTTG CCATCTTCAT AGGCACCAAC CCTGGGCTCA GTGGCAACGG TCTCAACGTG
GGCTCGCGCC GCCTGGCCAA GGCCCGTAGC GATCGCCCCG ATTTTAAGTA TGTGGTGGTC
GATCCCATCT TGCGCTCCTT AACCTCAGAG GTGGATAACG GCCAGGGCGA GTGGCTGCCC
ATCGTCTCGG GCGGCGATAC CGCGCTGATG TTCGCTATGA TGCAATACAT CATCAATCAT
GATCGCTATC GCCGTGCCTA TCTTGAGGCG CCCAGCCAGG CCTGCGCCGA TGCCATCGGC
GAGATCAACT ACACCAACGC CACCTATCTG GTGGTGAAAG AGCCTGGTCA TCCCCTGTAT
AACCAGTTCC TGACCGCCGA AGCTTGTGGC GTGGGCGAGG CCGAGATCAA GATGGTGATC
GACAAGGCTA CGGGTCAGCT GGTGACAGGC GAGAGCGAAC AACCGGCCGA GCTCTTCTAT
AAGGGCAAAC TGGCGATCGG TAATGGCGTC GAGCTGCAGG TGGAGACAGC CTTCTCACTG
CTTAAGCAGA GGGTGAACGG CTATCCGATG CGCCTGCTCT CCGAGCGCTG CGGCATCCCT
GTGGCCAAAA TAGAGGAGTT GGCTAAGGAG TTCACCTCCC ACGGGCGTAG CGTGGCTATT
GAGACCTGTA CCGGCTGTAA TGCCTCAGAC GGCGGTCAGT TTACCTTCGC CATGATCATG
CTGGGCACTC TGGTTGGCGC CCATAACGCT AAGGGCGGCA TGATGCACAT GGGGGGCGTG
GGCTACGCCG CCATGTACGA CATCTACGAT GGCCCTCTCT ATAACCTGAT GGATTTTGAG
CACACCTCGT TGACCGGCTA TAACGCCGAG CGCTCCGGCG ATTATGAGCT GAGCCATGAG
TATCAACAGA AGCTGGCCAA GGGGATAAAC CCTTACCCGG CGGAGCAGCC CTGGAACAAC
ACCTTTGTGC AGGATAACAG CGGCGAGCTG CTGGTGGCCC ATGCCAACAA GAACCCGTTC
CAGTTCAAGG CCTGGATCAC CTGGGCAACC AACCCCATCT ATGGCTGCTC AGGCCTGCAG
GATCAGGTGG AGGACTCCAT CAGAGATCCT AAGCAGCTGG GGCTAATCAT CGCCCTGGAT
CCCTATATCA ACGAGACCAA TGTGTTCGCC GACTATATAG TGCCTGACTC ATTGCAGTAT
GAGCAGTGGG CCAACTCACG CATGTGGGGC AGCGAGTTTG TCGGCGACGT GGCCTGTGTG
CCCGTGGTGG CTTCGCGTAA CGTCAAGACA GCCCATGGCC AAGAGGTCAA CATGGAGCAG
TTCTTGATCG ATATCAGCAA GGCGATAGGC TTGCCAGGCT TTGGTGACAA GGCGTTTAAG
GACATCGAGG GACGCGACTT ACCGATTCAT GAGCCGGCCG ACTTCTATGT GCCGCTGTTT
GCCAATATCG CTCACACAGG ATCTGTGCTG CCATCGCCCA CGGAGGAAGA TATCGCCTTT
ACCAGCGTGG ATCGTGTGCT GCCGCTGTTC AAGGCCAGAC TCAAGCCCGA GGAGGTGGGG
CCGACCGCCT ACATGCTGAC CCGTGGGGGA CGTTACGAGC GGGTGGATGA GCGTTACGAA
GGGGAGTTTT TCAACCCCAT GATGCGCATG GACACTCAGT TCCAGGTGTA CAACGAGTCC
CTGGCCCGGG TGAAAGACTC CTACAGTGGC GAGTATAACG ACGGCCAACC CGTCTATGAT
GTGGATCGCT TCTGGGACGG CTCGGCGGTG CGTGCGCTGT GGAAGGTGAA TGAGTATCCC
TTTAACCTGT CGACCTTCAA GCTGCATCTT CGTAGCCCTT ATTCTGTGGC GCTGCCACGC
ATCACGGCCC TGGGTGAGAC CAACTATATC CATCTGCACG AGGATGATGC CGCCAAGTTC
GACATCAAGG ATGGCGATAG GGCGCAGGTG CTGTCTCCTA AGGGGAAACA TATCGAGGGG
ATAGTGCAGG CCGATAAGAC GGTGGCTCGC AACACCATAG TGGTGGGCAT GGGTTATGGC
CACTGGTGCT TCGGCGCCAG CGATCTGGAG GTGGATGGCC AGGTGATTCC CGGCATTCCA
TCGAGAGGAA CGGGTGTCTG TCCTAACCCC TTCAACATAG TGGATCCTAG CCGTAAGGGC
GCCAGCCTCT ACCGGGACCG AACCTTTGGT TCGACCGCCA GACATGGTGT GCCTGTGGCG
ATCCGTAAGG TCTGA
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| Protein sequence | MDRRDFLKAG SVAAVMTTGA LGAKAATKAS TSDAEISRYA PTSLTPEYYF DQDKQLVENP
EQRFAFSKCF GCFNVCGARV SIDNKTDKVL RAVGNPYTLT NNAGQPFTME TPPKEAMLQL
SAVSGLSQSN RATLCGRGNA VPDAFEDKHR ITQCLKRVGK RGENRWQSIS YEQLLKEVIE
GGDLFGEGKV EGLRAIHDNP ALANPRYPDF GPVKNQLLVS TSSEQGARAD FLHRFVKESW
GTPNIGNKDS YCGHQQVAGC ALGCFDAVDE MALPQVDYEE TKFAIFIGTN PGLSGNGLNV
GSRRLAKARS DRPDFKYVVV DPILRSLTSE VDNGQGEWLP IVSGGDTALM FAMMQYIINH
DRYRRAYLEA PSQACADAIG EINYTNATYL VVKEPGHPLY NQFLTAEACG VGEAEIKMVI
DKATGQLVTG ESEQPAELFY KGKLAIGNGV ELQVETAFSL LKQRVNGYPM RLLSERCGIP
VAKIEELAKE FTSHGRSVAI ETCTGCNASD GGQFTFAMIM LGTLVGAHNA KGGMMHMGGV
GYAAMYDIYD GPLYNLMDFE HTSLTGYNAE RSGDYELSHE YQQKLAKGIN PYPAEQPWNN
TFVQDNSGEL LVAHANKNPF QFKAWITWAT NPIYGCSGLQ DQVEDSIRDP KQLGLIIALD
PYINETNVFA DYIVPDSLQY EQWANSRMWG SEFVGDVACV PVVASRNVKT AHGQEVNMEQ
FLIDISKAIG LPGFGDKAFK DIEGRDLPIH EPADFYVPLF ANIAHTGSVL PSPTEEDIAF
TSVDRVLPLF KARLKPEEVG PTAYMLTRGG RYERVDERYE GEFFNPMMRM DTQFQVYNES
LARVKDSYSG EYNDGQPVYD VDRFWDGSAV RALWKVNEYP FNLSTFKLHL RSPYSVALPR
ITALGETNYI HLHEDDAAKF DIKDGDRAQV LSPKGKHIEG IVQADKTVAR NTIVVGMGYG
HWCFGASDLE VDGQVIPGIP SRGTGVCPNP FNIVDPSRKG ASLYRDRTFG STARHGVPVA
IRKV
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