| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3232 |
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| Symbol | |
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| ID | 4921516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3857943 |
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| End bp | 3859121 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164842 |
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| Product | peptidase M50 |
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| Protein accession | YP_001095357 |
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| Protein GI | 127514160 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1994] Zn-dependent proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGGGCC TCTTTTCTTT GCCATGGCTT TACAGGCATA ATCCCCGCCA GATAGCGGTA
ACGGATAACG GAAAACACGT GGAACTACTG AGAATAGACT GTTTAGGCAA AGAGTTGCGC
CTTGAAGGCT CACTTGCCGG TTGGCAACAA CTCTTCTGGG ACAATCAGCT GGTGTCGGTC
AAGGAGGCCT GTGCCGAGAA CCAAGGGCTG AGAAACCACG AGTTTGAGTT AAGCCGCCAC
GACCCGCAGC AAGAGACGGT GCAGAAGATC CCCCTCACCC TGGAGGTGGA CCTCATCTGG
CAACCCTTCA CGCTCAACTA TCGCCTGCTG AGCGAAGACG CCGTACTGAG CGAAGGCAGC
CGCAACGCCA AGGATATCGA GCGCCAGACA CCGGTCACCC CAGTTAAGGC GCCACAGAAA
CTGAGCCTGG TGGGCCTGGC CTCCTTGGGC TTTAAGCTGC TCAAGAGCGC TAAGGTGATC
AAGGTGGTGC TGGCCGGTGC CAGCGTGGCC GCCTACTCCT GGCTCTTCTC CTTCCAGTTT
GCCCTGGCGC TGATCGCCTG TCTCATGTTC CACGAGTATG GCCATATTCG CGCCATGAAA
TATTTCGGCA TGAAGACCAA GGGGATCTAC CTCATCCCCT TCATGGGTGG TCTTGCGCTC
AGCGATGAGA AGATCAACAC CCGCTGGCAG GATGTAGTGA TCTCCATCAT GGGGCCCACC
TTCGGCCTCT TGATGTCGAT AGCGGCCCTG GTCGCCTACT GGATCACAGA TAACCCGCTG
TTTGCCGGGC TTGCCGCCTT CAACGCCCTG CTGAACCTGT TCAACCTGCT GCCCATATTG
CCGCTGGATG GCGGCCATAT CCTCAAGAGC ATCAGCTTCT CCATGAATAG CCTGATGGGG
CTGGTCGCCT GTGTGGCCGG CGCCGCCATC GGCGTCTTCA TCAGCTATAG CCTGGGGCTT
GCGTTACTGG GCTTCCTGCT GCTGATCGGC AGCCTGGAGA TCGTCTTCGA GTGGAAGAGC
CGTCACCAGA GCCATCTGCT GCCGCTGGAC AGATACGGGC AGATCTTCTC TACCATCTGG
TATCTGCTGA CCGTCGGCGC CCTGGTCGCC ATCATCTGGT ACCTGGCCGG TAGCGGCGAT
AACATGCTTG GGCTGCCGCT CAAGATACTG CAGAGCTAA
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| Protein sequence | MSGLFSLPWL YRHNPRQIAV TDNGKHVELL RIDCLGKELR LEGSLAGWQQ LFWDNQLVSV
KEACAENQGL RNHEFELSRH DPQQETVQKI PLTLEVDLIW QPFTLNYRLL SEDAVLSEGS
RNAKDIERQT PVTPVKAPQK LSLVGLASLG FKLLKSAKVI KVVLAGASVA AYSWLFSFQF
ALALIACLMF HEYGHIRAMK YFGMKTKGIY LIPFMGGLAL SDEKINTRWQ DVVISIMGPT
FGLLMSIAAL VAYWITDNPL FAGLAAFNAL LNLFNLLPIL PLDGGHILKS ISFSMNSLMG
LVACVAGAAI GVFISYSLGL ALLGFLLLIG SLEIVFEWKS RHQSHLLPLD RYGQIFSTIW
YLLTVGALVA IIWYLAGSGD NMLGLPLKIL QS
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