Gene Shew_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3229 
Symbol 
ID4921553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3854398 
End bp3854838 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content59% 
IMG OID640164839 
Producthypothetical protein 
Protein accessionYP_001095354 
Protein GI127514157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGAT TGTCGACATG GATGTGCCTA CTGGGCCTTT GTTGCGCTAA CGTTTTCGCC 
GCTCAGGTGA TCGTCAACTC TTCTGTGGAG ATCGCCGACA TCACCCCGAA AGATCTCAAG
CTGATCTTCG CCATGCAGAA GCTCTATTGG TCCGACGGTC AGAAGATCCA GGTCTTCGTC
CTCCCCAGCA ACTCCCCCAT ACATGAAGAA TTTTGCTATC AGCAGCTGGA AATGATGCCC
TATGTGCTGC GTCATCGCTG GGACCGCCTG GTGTTTTCCG GCGTCGGCGA GCGGCCGGTC
ACCCTGGATT CCGAGGCGCA GATGCGCGAG AAGGTGGCCA GCACGCCCGG GGCAATAGGC
TATGTGTCTG GTGGTGGCGG CGCGCTGGCC GTCGAGGTTG GTATCGAGCG TCAAGGAGGA
CAAGATGAAG CCGAGCACTA G
 
Protein sequence
MRRLSTWMCL LGLCCANVFA AQVIVNSSVE IADITPKDLK LIFAMQKLYW SDGQKIQVFV 
LPSNSPIHEE FCYQQLEMMP YVLRHRWDRL VFSGVGERPV TLDSEAQMRE KVASTPGAIG
YVSGGGGALA VEVGIERQGG QDEAEH