| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3151 |
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| Symbol | |
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| ID | 4921989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3745672 |
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| End bp | 3748866 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640164761 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095276 |
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| Protein GI | 127514079 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5373] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGA AGGAAGATGT CAACAAGCTC ACTCAGGCCC TGGAGGCGAT GCAATCACAG
CAGGCATCGG ACCGCGCGGC GCTCACGAGT CAGTTAGCGG AGTTTAGCCA GCAGCTGGCC
GAGCTCAACG CGCGGGTAAA TGCCCTTGAA GGCTACGACC AGGCCGAACA TCCAGAGCAG
ACGCAATCGA CGACTGCGCA CACAAATTCT ATAGATTCAA CCTCTGCATC GGCGCCTAGC
CACTCAAGCC AATACTTGCC ATGGCAGACT CAGCCAGAGC AGTTAAAACC AGAGCCGTTA
CAGTCTGCGC AGCTAGAGTT AGAGCAGACA CCGTCACCCC AGCAAGGCGA ACTCAGCCAG
CAGGCCGATA CCAGCTATCG CCACGACGCC TGGCAGCGCC AGCCCCCTCA AGCAGAGAAA
CAGGCTAAAA CTCAGCCTTC GGCTCGCTCA ACGATAACCA CAAAACAGAA GGCCGCCACT
CCAGGTATTG GCAAACAGCT GGCTAACTCG GTGGCCCAGC TACAGGGCTC TTTGGGCCAG
CTGGTTAATT TGCTACTCGG CCCCTTCGGC GGACTCGGCG AGCAGGCCAA GGCCTTCTAT
CAACACTATC AGGCCAAGGG ACAGGGCGCG GTATTTCTGA TGACCCTCGC GGGCATTATC
ACCCTGACCC TGGGCTTTGG CTACCTGCTG CAATACTCCA TCAACCACTG GTTCTCCGAG
CTTGGCAAGG CCATGCTAGG GCTTATCACG GCCAACAGCG TGATCGCCGG CGGCCTGTTT
ATCCGGCGGG CCAGGCCCGG TATGGAGGAC TATGCCTCGG GCATAGTCGG ACTCGGCGTC
ATCTTAAATT ACCTCTGTAT CTATTTCCTC GGCCCCTATT TTGAGCTGAT CCCCGAGAGC
GCCGCCTTCT CGCTGATGCT GGTCAACACC CTCTTGGGTT ACGGCCTGGC GATGAAGCAG
GAGACTAAGG TGGTGGCCAT CATCGCCCTG TGCGGCGGCT CGCTGGCGCC GCTTATGCTG
CTCGATGCCA GCCAGGCGCC ACTGCTCTAT CTGCCCTATT TGCTTATCAT AGGCGCCTGC
TCCCTGGTGC AGAGTCACAG GCTAAACTGG CCCGTGCTGA TAGAGATCAC CGCGCTGCTG
CATATCGCCT GCGTGCAGCT ACTGAGCTTC TTTCTGTTTC TGCCGCTGGC GCCCATCGAC
CCCATGGCCA TGCTGGCGCT GGGGTGCATC AATGCCCTCT TCTATCTCTA TGGCCTGGGT
AGCCTCTGGC TCCAGACCAA GCGGGAGCCC AGTGCGCGCC TGCTCATGGT GCCCGTGGCC
ATGCTCTGTT TCACCCTCTA TACCCTGGGG GAGTTCACCC ACTACGCCGG CGAGCTGTTC
GCGATCAACG GCGCCATCTG CACCCTGCTC TATTGGAAGA TACGGCGCGA TAGCCTGATC
GCACCGCTGA TGCTGGCCGC GGCCGGGGTG TTCGCCGGGG TGGCGGCGCT CTACCTCATC
AGCGCCGATC TCCTTGGCTT GGTGCTGTTG ATCGAGGCAC TGCTGCTACT CTGGCTCGGC
GCTAAACATG ATTTTATCGC GATTCGCACC GAGGCCTATA TCCTGTTGGC GATGGGCCTT
GGCAGCAACC TGCTGACCCT GTTCGACAGC CTGGCAGTGA GTCACCGCAA GCTGGGTGGC
GCCGCGGGAA TGACAGATAA CCTTATCCTC ATTCTCACAC TTTGCATCAC TATGGCACTA
AGCTGCGCAG CCTGTTATCA GGCGATACGC CTGATTGATG CCCTGGGGGA TAGGCTTGCC
GGGATGGAGC GACTGCTGCG CCGCGCCCTG CAGGGCGTTT TGGGTCAGCT GCTGGCGATC
ACCGCCCTAT TTATCGGCTA CTGCTTGAGC CCAGACTTCT ATCTCAACGG CCTGCCACTG
ATCGCCTTGA TGCTGCTCTA CCTGGGTAAG CGAGACGGGC TGCGCTTTAC CGAGATCATG
GCCTGGTTCT GGCTACTGCC GCTAGGCGGC CTCATCATGC TGGGCATGCT AGAGGCGGGC
AGCGTCAACT TTGCCCAGCA GCCTCTCAAC GCCAAGCTGG CGCGTATCGA GCTGTTCGGC
AGCCTGCTGC TGGCCTACAA CTGGTATAAG CGATACACAC CTCAGTCGCC GCTGCTAAGT
CTGGCCTACT ATGCTCAGCT CATCTGTTAC CTGGCGCTGC CACTCCTGCT GCTGCCTAAG
GTGCTGCGCA GCTATCTGGA GCTGCTCCCC ATCTACCTCT GGCTGGCCAG CGCCATGGCC
CTTGGCCTCG CGAGGTTCGT GCGCCACCGG AGTCTGGTGA TCGAGACGCA AGTGTTATGT
GCCACGGCCA TGCTGTTCAC CGCCATTAGC TGTCTGGACA ATCAGTGGCA GGGGTTAATC
GCCCTCGCCA TAGGCGCGCT GGCCCTAGGC ACAGTGCACG GCCGCTATGA GCAAATGAAC
CGGCACTGGC GCATATTACT GCGCTTCCCC TGGCAGTTGA GTCCCTTCTA TTTTGCCTTG
GTCCTGGCCG TTGCCGTGCA GACCCTGTCT GGGCTTATCG CCCCGGGTTG GTCCCTGGTA
TTCCTGGCGT TGACCGGCTA CTTTGCCCTG CTGGTCGAGC GTGACAACGC CCTGGGCAGA
CGTTTCGCCA AGGCGCTGAG ACCCGGCTAC GATCTCGCCT ATGGCCTGCT ACTCTTGCTG
CCGCTGGCGC CCATCATATT GCACGGCGAT CGCCCCCTGG GGCTGGACAT GAGCAGCCTG
CTGTTTAGCC TCAGCGAGCT GGGCATATTG GTGGTGCTCG CCTGGTATCT CAGGGGCAAG
CGACTCGGCA TAGCGTCCCA CAAGAAGCTG CTGCCCAAGC CCGCCCTGCT GTGGGGCTGG
CACAGCCTGT TGGCGGTGAG CTATTTCCTC TGGAGTTATC AGCTGGGGGA TCAGGTAGCC
GCGCCTGTCA GCAGCATCCT GTTGGTGAGC CACGGCAGCG CGCTCATGTT CCTCAGCCTG
CGACCGCAAC AGACCAGCCT GATACGCATG GCGGGGATCC TCTTCGGCCT CGCCTGTCTC
AAGATATTGT TTATCGACAT GGCCTCCTTC GTGCTGGTGC AGAAGGTGGT CGCCTTCATC
GTTATCGGCA TTATGCTGCT GACGGTGGCC TACTTCTATC AGAAGCAGAA GAACCGGCTG
CAGGCTCTAG GCTAG
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| Protein sequence | MTLKEDVNKL TQALEAMQSQ QASDRAALTS QLAEFSQQLA ELNARVNALE GYDQAEHPEQ
TQSTTAHTNS IDSTSASAPS HSSQYLPWQT QPEQLKPEPL QSAQLELEQT PSPQQGELSQ
QADTSYRHDA WQRQPPQAEK QAKTQPSARS TITTKQKAAT PGIGKQLANS VAQLQGSLGQ
LVNLLLGPFG GLGEQAKAFY QHYQAKGQGA VFLMTLAGII TLTLGFGYLL QYSINHWFSE
LGKAMLGLIT ANSVIAGGLF IRRARPGMED YASGIVGLGV ILNYLCIYFL GPYFELIPES
AAFSLMLVNT LLGYGLAMKQ ETKVVAIIAL CGGSLAPLML LDASQAPLLY LPYLLIIGAC
SLVQSHRLNW PVLIEITALL HIACVQLLSF FLFLPLAPID PMAMLALGCI NALFYLYGLG
SLWLQTKREP SARLLMVPVA MLCFTLYTLG EFTHYAGELF AINGAICTLL YWKIRRDSLI
APLMLAAAGV FAGVAALYLI SADLLGLVLL IEALLLLWLG AKHDFIAIRT EAYILLAMGL
GSNLLTLFDS LAVSHRKLGG AAGMTDNLIL ILTLCITMAL SCAACYQAIR LIDALGDRLA
GMERLLRRAL QGVLGQLLAI TALFIGYCLS PDFYLNGLPL IALMLLYLGK RDGLRFTEIM
AWFWLLPLGG LIMLGMLEAG SVNFAQQPLN AKLARIELFG SLLLAYNWYK RYTPQSPLLS
LAYYAQLICY LALPLLLLPK VLRSYLELLP IYLWLASAMA LGLARFVRHR SLVIETQVLC
ATAMLFTAIS CLDNQWQGLI ALAIGALALG TVHGRYEQMN RHWRILLRFP WQLSPFYFAL
VLAVAVQTLS GLIAPGWSLV FLALTGYFAL LVERDNALGR RFAKALRPGY DLAYGLLLLL
PLAPIILHGD RPLGLDMSSL LFSLSELGIL VVLAWYLRGK RLGIASHKKL LPKPALLWGW
HSLLAVSYFL WSYQLGDQVA APVSSILLVS HGSALMFLSL RPQQTSLIRM AGILFGLACL
KILFIDMASF VLVQKVVAFI VIGIMLLTVA YFYQKQKNRL QALG
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