| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3109 |
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| Symbol | |
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| ID | 4922214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3690445 |
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| End bp | 3691314 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164719 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095234 |
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| Protein GI | 127514037 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0895719 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAC AACCCTGGAT ACGCCTGCTG TTACTCACCT CGGTCACCAT GCTGGCCTTT
GCGGCCAACT CGCTGTTTTG CCGCGAGGCC CTGGCATCGG GCAGCATCGG CGCAGCCAGC
TTCACCCTGA TACGTATCGC TTCCGGCGCC CTGGTTCTGG GGATACTCGC ATCACGTCAT
ATTCGCGCCG GCGAGCTTGG TGGTAACTGG CTGTCGGCAA CGGCGCTATT TGGTTACGCG
GTCGCATTCT CTTTTGCCTA CAACAGCCTA AGCGCCGGCA CGGGTGCCTT GTTGCTGTTC
GGTGCAGTGC AGATCACCAT GATCCTCTAC GGTTTATGGT CGGGCGAGCG GATAAATCGA
AAACAGATGA TAGGCGCCCT GCTAGCTGGA GCGGGATTGG TATGGTTAGT GCTGCCGGGC
GTAAGCGCTC CGCCCTTAAT AGGCGCCATG CTGATGATAA TCGCCGGGGT TTCCTGGGGC
GTCTACTCCC TGCTAGGTCG CGGCACAAAG CGTCCCACAT TGGCCACGGC GGGGAATTTT
ATTCGCGCGG TGCCCATGGC CCTGGTGCCT TTTGCCCTGC TCTCTAATTC AGAGACGATC
AGCGCCACCG GGATTGGCTA CGCCGTGGCC TCAGGCGCCC TCGCCTCGGG GCTGGGCTAC
GCCCTATGGT ATTTAGTCCT GCCATCTCTT TCTGCCGTCA CCGCCGCGAC CGTTCAGCTC
AGCGTACCCA TTATTGCCGC CTTCGGCGGC TTCATCTGGA TCGGCGAGGC ATTCACAAGC
AGACTCCTGC TCGCCTCCAT CGCCGTCCTC GGCGGCATTG CCCTGTTTGT CATGAGTAAA
CAATCCTCTC ACGTAATAAA AGACAAGTAG
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| Protein sequence | MPQQPWIRLL LLTSVTMLAF AANSLFCREA LASGSIGAAS FTLIRIASGA LVLGILASRH
IRAGELGGNW LSATALFGYA VAFSFAYNSL SAGTGALLLF GAVQITMILY GLWSGERINR
KQMIGALLAG AGLVWLVLPG VSAPPLIGAM LMIIAGVSWG VYSLLGRGTK RPTLATAGNF
IRAVPMALVP FALLSNSETI SATGIGYAVA SGALASGLGY ALWYLVLPSL SAVTAATVQL
SVPIIAAFGG FIWIGEAFTS RLLLASIAVL GGIALFVMSK QSSHVIKDK
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