Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3102 |
Symbol | |
ID | 4922207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3682413 |
End bp | 3682790 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640164712 |
Product | hypothetical protein |
Protein accession | YP_001095227 |
Protein GI | 127514030 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.593174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCA ATCTACATGG TATCGCCATA GGCATAGAGC GCAGTCAGGA TGATTTTTAT CTCGCCTTCA AGGCCGTTGG CAAGTTGACC CACGAAGACT ATGAGCAGAT GACGCCGCTG TTGGAGTCAG CCCTGGCCGG CATAAAGACG CCTGAAATCG TGGCGCTTAT CGACATCACA GAGCTCGATG GCCTGTCGCT GCATGCGGCC TGGGACGACC TTAAGCTGGG CTTGAAACAC GGTAAGGAGT TTAAGCGGGT GGCCATCATA GGGCAGGGGG AGCTACAGGA GTGGGCGACC CGGGTGGCAA ACTGGTTTAC CCCGGGCGAG TTTAAGTTCT TCGAGGATAA ACGCGATGCA CTCGACTGGC TGTGTTAA
|
Protein sequence | MSSNLHGIAI GIERSQDDFY LAFKAVGKLT HEDYEQMTPL LESALAGIKT PEIVALIDIT ELDGLSLHAA WDDLKLGLKH GKEFKRVAII GQGELQEWAT RVANWFTPGE FKFFEDKRDA LDWLC
|
| |