Gene Shew_3102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3102 
Symbol 
ID4922207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3682413 
End bp3682790 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content55% 
IMG OID640164712 
Producthypothetical protein 
Protein accessionYP_001095227 
Protein GI127514030 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.593174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA ATCTACATGG TATCGCCATA GGCATAGAGC GCAGTCAGGA TGATTTTTAT 
CTCGCCTTCA AGGCCGTTGG CAAGTTGACC CACGAAGACT ATGAGCAGAT GACGCCGCTG
TTGGAGTCAG CCCTGGCCGG CATAAAGACG CCTGAAATCG TGGCGCTTAT CGACATCACA
GAGCTCGATG GCCTGTCGCT GCATGCGGCC TGGGACGACC TTAAGCTGGG CTTGAAACAC
GGTAAGGAGT TTAAGCGGGT GGCCATCATA GGGCAGGGGG AGCTACAGGA GTGGGCGACC
CGGGTGGCAA ACTGGTTTAC CCCGGGCGAG TTTAAGTTCT TCGAGGATAA ACGCGATGCA
CTCGACTGGC TGTGTTAA
 
Protein sequence
MSSNLHGIAI GIERSQDDFY LAFKAVGKLT HEDYEQMTPL LESALAGIKT PEIVALIDIT 
ELDGLSLHAA WDDLKLGLKH GKEFKRVAII GQGELQEWAT RVANWFTPGE FKFFEDKRDA
LDWLC