| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3092 |
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| Symbol | |
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| ID | 4922256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3672324 |
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| End bp | 3673892 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164702 |
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| Product | membrane-flanked domain-containing protein |
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| Protein accession | YP_001095217 |
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| Protein GI | 127514020 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3428] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAC GCTTCGCCCA GTGGGCGAGC CTGTCTCCCT GGTCGATCGT CAGCTTCAGT
GTCGGCAGCC TACGCCAGCT ACTCACCAAT GGTTACGCGC TGATCCCCCT GGTCTACACC
GGCTGGCAGC GGGGATTCAA CTCCCCCTGG CTGCTGCTGG TCGCCGCGGG TCTGGTCATG
ATCACCCTGA CCTATGCCAG TCTGCAATGG GCCAAGTATC GCTATCGACT CAGCGACGCC
AAGCTGGGGA TCCGCCAGGG ATTGGTGTTT AAACGCGCCC AGGAGATCCC GCTGAACAAG
ATTCAAAATG TGCGACTGGA GCAGCCCCTC TACTTCCGCC CGCTCGGTCT CTACAGCCTG
GTGGTGGAGA CGGCCGGTTC CAAGCAAGAT GAGGCTGTGC TGGCCGCGGT CAACTATCGC
CAGGCCATGC AACTCAAGAA ACACCTGTTT GCCTCCCAGT CCCAACTGCA AGGTACAGAG
ACTATCTATC CCGATGGCGA GACCATGGCG CCTGCCAGTG AGCCGCAGCA AGCGGGCATG
ACGGCCACTA CGGCAAGCGC GCAATCCCGG CGTCAGGGCG AAGGCCTAGT GGTGGCCAAA
GATCTTAAGG ATCTGCTGAT CTTCGGCTTC TATCAGAACA ACCTCATCTG GCTCTCGATA
ATCTCAGGCT CCATCATAGG CCAGGTAGAC TGGGAATCAC TTGGACAAAC CAGCATGGTG
CAGGGAGCCT GGCACTGGTA TCAGGCCAAT ATCGCCACCG GACTTATCTA TCAGATCCTG
GCGGTAGCGG CCGCGCTAAT ACTCCTCTAC CTACTGCTCT CGCTCATCTC TATCGCCTCG
GCCGTGCTTA AGTATTACCC CTATCGCCTC AGCCTGCGTC AGGGAACGCT GCATCGAACC
GGCGGCATAC TGGCAAAACA GCAAGATGCG CTGCGCCTGC ATAGGGTGCA GATGGTTCGA
TTCGAGCAGC CCGTCATCGG CAGGCTTATC GGGCGCTGGA CGGTACATTT CGAGCAGGTA
AAAGGCAATG AAGTGGAGCA GCTCGCCAAG CGCCACCTGC TGATCCCCAG CATGCGCCGT
GAAGATATCC CTCAGGCCTT CGGCCGATTC GATAGCCTGG CGGCCAAGGC CAACACCCTG
CCCGCCAGTT ATCAGGGGAT AAACAGCGGC TGGCTTTGGC GCCGCGCCAT CCCGCTGGCA
CTGCTTCCCG TGGTGATGAC CCTTATCCTT GGCCTCAACC CCTTTACCGA ACTGGTCGCC
GGCTTCACCC TGGTGGCGCT TGTTGGCCTC TATCTCAACT ATCGTCAATG GGGCTATCGC
CTGGAGGGGG ATGACTGCTG GATCCATACG GGTGCGCTGG GGCAGACCTG GCGACTGGTC
CCCCTGAGTA AGACCCAGGA TGTCTGTATC TCACAGACGC CGGGCCAACG GCGTAACGCC
TTGGCCACCT TGCACTTAGG CCTGGCATCA GGCCCCCTGG TGATCCCCTA TATTCCCCTC
AAAGAGGCTA GATTGATTGC CGAAACCGCG TTAAGTTTGA CCAGAGAAGA TCCGAAAAAC
TGGATATAG
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| Protein sequence | MSTRFAQWAS LSPWSIVSFS VGSLRQLLTN GYALIPLVYT GWQRGFNSPW LLLVAAGLVM
ITLTYASLQW AKYRYRLSDA KLGIRQGLVF KRAQEIPLNK IQNVRLEQPL YFRPLGLYSL
VVETAGSKQD EAVLAAVNYR QAMQLKKHLF ASQSQLQGTE TIYPDGETMA PASEPQQAGM
TATTASAQSR RQGEGLVVAK DLKDLLIFGF YQNNLIWLSI ISGSIIGQVD WESLGQTSMV
QGAWHWYQAN IATGLIYQIL AVAAALILLY LLLSLISIAS AVLKYYPYRL SLRQGTLHRT
GGILAKQQDA LRLHRVQMVR FEQPVIGRLI GRWTVHFEQV KGNEVEQLAK RHLLIPSMRR
EDIPQAFGRF DSLAAKANTL PASYQGINSG WLWRRAIPLA LLPVVMTLIL GLNPFTELVA
GFTLVALVGL YLNYRQWGYR LEGDDCWIHT GALGQTWRLV PLSKTQDVCI SQTPGQRRNA
LATLHLGLAS GPLVIPYIPL KEARLIAETA LSLTREDPKN WI
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