| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3077 |
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| Symbol | |
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| ID | 4922320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3650646 |
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| End bp | 3652247 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640164687 |
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| Product | peptidase S10, serine carboxypeptidase |
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| Protein accession | YP_001095202 |
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| Protein GI | 127514005 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATA TTTTTACGCG GCGACACTCA GGTCTAAATC TGTACAATCA TTTGACTCAT
TCCCTATCGC GACTCAAGCT CTCCAAGCAA TTGCTGGGGG CGGCTGGCCT GTCGCTGCTG
CTTCTGAGCC TTCCCGGTCA GGCGGCTCAG GAGAAGTCTA ACGGCAAGCC TGCCAAGACA
GAGGCACAGG CGCCAGAGGC CAAGGTCTAT CAAACCACGG GTCAGGTAAA GATCAATGGC
GAGCGGGTGC ACTATGAGAC CATCGCCTCG GAAACCATCT TAGAAGATGA CAAGGACAAG
CCGCTGGCCA GTATCTTCTC GGTCACCTAT CTGCGCACCA AAATCGAGGC CAGTCAGCCA
CGCCCCGTGA CCTTCGTGTT TAACGGCGGC CCTGGCTCGG CCTCGCTCTG GCTACACATG
GGACTGTTTG GGCCTAAGCG TGTGGTGGTG CCGGGTGATG CCCAGGACGA TGGCGCCGCG
CCTTATCACT TAGTGGATAA CGAATTTTCC ATGCTGGATA AGTCGGATCT GGTGTTTATC
GATCCCGTGG GCACAGGCTT TAGCCGCGCG CTGGGTGAAC ACAAGGGCCA GGACTTCTGG
GGGGTGAAAG AGGACGCCCA ATCGATTGCC GAGTTTATTC GTCGCTGGCT CATTGAACAT
GGCCGCTGGA ACTCGCCCAA GTATATCGCC GGTGAGAGTT ATGGCACCAC CCGCGCCGCG
GCATTGGTGG ACGAGCTGCA ATCTGGCTGG ACAGATATTT CGGTCAATGG CGTCATGCTG
ATCTCATCGA TTCTCGATTT TAGCCATGCC CGCTATCAGC CCGGCAACAA TCAGCCTTAC
ATTGGCTTCC TGCCGACCAT GGCGGCCACC GCCTTCTACC ATGACAGGGT TGCTGCGACC
GATAAGGCGA TGGGGCTGAG CGCCTTCGTC GAGGCGGCGC GTCAGTTTGC GATGAACGAT
TATGCCCTGG CGCTGCTTAA GGGTACTCGT TTGCCCCAAG CTCAATACCA GGCGGTGCGC
CAACAGCTGG CACGCTTTAC CGGACTAACA GAGGATTACC TGGACAGGGT GAATCTGAGA
GTCAGCGCCA GCCGTTATAC CAAGCAGTTG CTCAGGGATG AAGATCGCAC CGTGGGGCGT
TTGGACAGTC GTTATCTGGG CGTAGACTAT GACAGCGGCG GCGAGCGTAC CGATGCCGAC
CCATCTGGCT ATGGCATAGA TGGCGCCTAC ACGGCGGCGA TTCATCAATA TCTGTATCAG
GATCTCGGGG TGAAGATCAC CCGTCCCTTT AACGTGCTCT CGGTCGACGT TAACCGTGGC
TGGAACTGGA ACATCAGCGG TAAGCAGATG CACTATGTGA ATGTCGCCCC CTATCTCGGT
CGCGCCCAGC GTGAGAACAA GGATTTCAGA ATCCTGGTGG CCAATGGTTA CTATGATTTT
GCCACCCCCT TCTTCGCCAC CGAAAACACC CTGGCCGATA ACGGCATAGA CAATAGCCGC
GTGGAGATGC ACTACTACGA GGCGGGCCAT ATGATGTATA TTGAGCCCTC GTCGCTAAAG
GCGCTGGCTA AGGATATTCG CCAGTTCTAT CAGGCGGACT AA
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| Protein sequence | MADIFTRRHS GLNLYNHLTH SLSRLKLSKQ LLGAAGLSLL LLSLPGQAAQ EKSNGKPAKT
EAQAPEAKVY QTTGQVKING ERVHYETIAS ETILEDDKDK PLASIFSVTY LRTKIEASQP
RPVTFVFNGG PGSASLWLHM GLFGPKRVVV PGDAQDDGAA PYHLVDNEFS MLDKSDLVFI
DPVGTGFSRA LGEHKGQDFW GVKEDAQSIA EFIRRWLIEH GRWNSPKYIA GESYGTTRAA
ALVDELQSGW TDISVNGVML ISSILDFSHA RYQPGNNQPY IGFLPTMAAT AFYHDRVAAT
DKAMGLSAFV EAARQFAMND YALALLKGTR LPQAQYQAVR QQLARFTGLT EDYLDRVNLR
VSASRYTKQL LRDEDRTVGR LDSRYLGVDY DSGGERTDAD PSGYGIDGAY TAAIHQYLYQ
DLGVKITRPF NVLSVDVNRG WNWNISGKQM HYVNVAPYLG RAQRENKDFR ILVANGYYDF
ATPFFATENT LADNGIDNSR VEMHYYEAGH MMYIEPSSLK ALAKDIRQFY QAD
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