| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3072 |
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| Symbol | |
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| ID | 4922315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3647350 |
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| End bp | 3647943 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164682 |
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| Product | cold-shock protein, DNA-binding |
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| Protein accession | YP_001095197 |
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| Protein GI | 127514000 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA GAGCTAAGCG AGGAACGCTT GTTCGTTGGA ATCAGGAGCA GAGGGTAGGT
TTCATCGCCC CGGACGACGG ATCGGACGAA CTCAGAATTT TTGGCATCAA TTTACTCCCC
TATGAACACA TGCCTAAAGA GGGTGAATCT GTGGTGTATC GTCAGTGGAA AGACGCGCTG
CGCGGCACTA AGGTCACCAA GGGCGAGATA GACCTAGGTA ATCCTATCAC CTTGACCTCT
CCTTTCGAGT CCCATGATAA GTTTGACAGC GAAGATGCCA TCAGCTGGCG CGTCAAGGTT
GGTCTGGTGG CCCTGGCGAT CGCCTTTGGT AATCTGCTCT ATCTGTTTAT GGTCAACTAT
GACTACTCGG CCGATGTGGA TATCAAACCG CCGGAGGGGC TGTTCCCCCC TGGGTCTGAG
TATTACGTGG GTAAGCAGAA GCTGCAGAAT GTGGTGTTTA GCTGCGATGC CCGCCAGCAG
TGTCTGCAGA TGACCTCCTG TCAGGAGGCC AAATACTTCG CCAACCATTG CCCCGGATTT
GAGGTCAATG TGGGCGATAC CCCCTGCGTC AATCTCTGGT GTAAATCAAA TTAA
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| Protein sequence | MDIRAKRGTL VRWNQEQRVG FIAPDDGSDE LRIFGINLLP YEHMPKEGES VVYRQWKDAL
RGTKVTKGEI DLGNPITLTS PFESHDKFDS EDAISWRVKV GLVALAIAFG NLLYLFMVNY
DYSADVDIKP PEGLFPPGSE YYVGKQKLQN VVFSCDARQQ CLQMTSCQEA KYFANHCPGF
EVNVGDTPCV NLWCKSN
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