Gene Shew_3050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3050 
Symbol 
ID4922789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3623064 
End bp3623420 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content58% 
IMG OID640164660 
Producthypothetical protein 
Protein accessionYP_001095175 
Protein GI127513978 
COG category[S] Function unknown 
COG ID[COG4925] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA AGATTCAGCT TGTGGTTAAG GGCGAACGCT TGAGCGCCAC TCTGGCCGAT 
AACCGAACGG CGCGGGATTT CTATGCCCTG TTGCCGCAGC GGCTCACCCT GAAAGATTAC
GCCCAAACGG AGAAGATAGC GTATCTGCCG CGTAAGCTGA CCACCGACTC GGCCCCCGAA
GGTGCCAAAG GCAGATTGGG CGATGTCTGT TACTACGCCC CCTGGGGAAA TCTGGCCATT
TTCTATCGCG ACTTTGGCTA CGCCGCCGGG CTGATCCCGC TGGCGCATAT CGATGGCGAT
CTCGGCGCGC TCACCATGGC AGATAGCCTT GAGGTGGTTA TAGAGGCGGC AGAGTAA
 
Protein sequence
MTMKIQLVVK GERLSATLAD NRTARDFYAL LPQRLTLKDY AQTEKIAYLP RKLTTDSAPE 
GAKGRLGDVC YYAPWGNLAI FYRDFGYAAG LIPLAHIDGD LGALTMADSL EVVIEAAE