| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3045 |
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| Symbol | |
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| ID | 4922784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3617527 |
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| End bp | 3618633 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640164655 |
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| Product | sugar-binding protein, putative |
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| Protein accession | YP_001095170 |
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| Protein GI | 127513973 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATGC TTATCAAGAC GTTAGTTGCT AATACCTTAG CTACGACTAA CCTAGTTATT
AGGAAATGGA TTCGAGAGGC TATTGTGACT CGGTTACTCA TCACCCTCAT CTCGCTGACC
TTACTGGCCA CCACCACGCT CAGCGCCGAT GTCAGTGCCA AAACCCTGAG ATTCGCCGTA
GTGCCAAAAT TTTACGGCGC CTTCTTCGAT CAGAGTAAGC TCGGCTGCGA AGCCGCCGCC
AGACAGCTCA AGGATGTCGA GTGTATCTAT CTGGGGCCAG AGATCTCCAG CGTGCGCCTA
CAAGATAAGG TGATCGAGCA GCTTATCGAC CAAGGCATAG ACGGCATTGC CGTGGCCATC
ACTCAGTCTA AGTTTCTCGC CGAAAACAGT CTCACCAAGG CCAAGGCCGC CGGCATCCCG
GTGATCACCT ATGACTCAGA TTTCGACGCC CCAACCCTGG CCGAGCATCA AGATCTACGC
CGCGCCTACA TAGGCACAGA CAACTTTGCC TTTGGCCTGG CACTGGGCGA GCAACTCAAA
AAACTCAGGC CCAATGGCGG CACCCTGATC ATCCAAACCG GCCGCCCCGA CTCCCCCAAC
CTCAACCTCA GGATCATGGG CATTCGCAGT GCACTATCTG GCAAAACCTA TGAAAGCCCT
CCGGGCAAGC GGCTGCAAAA CGATAACGGC TGGACAGAGA TCAGAGAGCC CTTCTCCAAC
TTCGATCAGC TCAGTCAGGC GGTGAAGCAG ATGGAGTCTG TCATGAAAGG CAAACCCATC
AAGGCCGACT CCTTTATCGC CGTAGGTGGC TGGCCGCAAA ACGATGAGGC CCTGTATCGC
AAGATGATAG CGCCCTATAA AATCAAGCTA AATAACAAAG AAATAGTCGT GATTATCTCA
GATGCGGCGC CGCCACAACT GGCCATGCTA CAAGACCACC TCGCCCATAC CAACATAGGC
CAGAGCCCCT ACGAGATGGG CCGCCAGGCG ATCTTCACCC TGCACAAAAT TGTCAGCGAC
CAGGCCTTCG AGCAGATAGT CTTTACCCCC ATCAAACTCT GCACACCCGA AAACGCCGAG
ACCTGCACCA AGAGCGTCAG CGACTGA
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| Protein sequence | MAMLIKTLVA NTLATTNLVI RKWIREAIVT RLLITLISLT LLATTTLSAD VSAKTLRFAV
VPKFYGAFFD QSKLGCEAAA RQLKDVECIY LGPEISSVRL QDKVIEQLID QGIDGIAVAI
TQSKFLAENS LTKAKAAGIP VITYDSDFDA PTLAEHQDLR RAYIGTDNFA FGLALGEQLK
KLRPNGGTLI IQTGRPDSPN LNLRIMGIRS ALSGKTYESP PGKRLQNDNG WTEIREPFSN
FDQLSQAVKQ MESVMKGKPI KADSFIAVGG WPQNDEALYR KMIAPYKIKL NNKEIVVIIS
DAAPPQLAML QDHLAHTNIG QSPYEMGRQA IFTLHKIVSD QAFEQIVFTP IKLCTPENAE
TCTKSVSD
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