| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3024 |
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| Symbol | |
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| ID | 4923075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3590943 |
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| End bp | 3592613 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164634 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001095149 |
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| Protein GI | 127513952 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACCC TAACTAAAGT AAGTCTCGCC ATTGACCTGC TGTTTTCCGG CAGTGCCCTG
GCACAAACCA CCCTAATCCA TAACCTCAAG GGCTACACCC TGGAGCAGGG CAAGCTGACC
CAATTTAGCG CCATCGCCTT TAGCGGAGAC AAGATAGAAA AGATCTACCA GCAGCCGCCG
AATGAGCTGC AAACGCAATC TACTAACGTC AAGGTGATCG ATGCCAAGGG GCAGACCATG
TTACCTGGAC TCATCGATGC CCACGGTCAC GTGCTCGGCT GGGGGCTAAA TTTGATCCGG
GTCGATCTCA AGGGTAGCGA GTCTGAACAG GCCGCCGTAG CGAGAGTTCA GGCCTTTAGA
AAGCAAAACA GGGATCTTAA CTGGGTGCTA GGCCGAGGCT GGAACCAGGT GCTCTGGCCA
GAGAAAAGCT TCCCCACGGC CAAGACTCTG GATAAGGTCT TTCCCGACAC TCCTGTGTGG
CTAAGACGGG TCGATGGCCA CGCCGGCTGG GCCAACAGCG CCGCCATGAA GCTAGCGGGC
ATCAATGGCG ACACCCAGGC CCCCAGCGGC GGCGAGATAA TCCGCGACGA TAAGGGACAA
CCCAGCGGTG TGTTTATCGA CAATGCCATG GCGCTGATCG AGCAGCAGAT CCCAGCCCTG
ACCCAGGCCG AGCAGGCCCG CGTACTGCGC GCGGCCATGA CAGATCTCGC CCGTCTCGGC
CTCACCAGTG TGCACGATGC AGGTGTCGGT CACGATACCC TCGCCGCCTA CCGCCAGCTG
GCGGACGATA AGCAGATGCC GATCCGCATC TACGCCATGG TCGCCGCCGA CGATAGTCAG
TTCGACAAGA CCCTGGCCAA GGGCCCCTAT CGCCATCCTG GCAGCATGCT GGATATCAGC
AGCGTGAAGA TCTCCGCCGA TGGCGCTCTG GGCAGCCGCG GCGCCGCCCT GCTACAGGAC
TACTCGGATC TGCACGGCCA TAAGGGACTG CTGCTCTACA AGGAAGATGA GCTGAAGGCC
TTGATGCTGA AGTCGATGCA GGCGGGATTT CAGGTGAACA CCCATGCCAT AGGCGATCGT
GCCAACAAGC TGGTGCTGGA TGATTACCAG AGTCTGATCG CCAAGACCCA CACCAAGGCG
CTGAGACACA GGGTCGAGCA CGCCCAGATA CTGCAACTGA GCGACATTCC CAGGTTTGCC
GAGCTTGGGG TGATCGCCTC CATGCAAGCA ACCCACGCCA CCAGCGACAT GAACATGGCC
GAAGACAGGG TCGGCCCCCA GCGGATCAAG GGCGCCTACG CCTGGCGTAA GCTATTGGAT
AGCGGCGCGG TGATCGCCGC AGGTTCAGAC TTTCCCATCG AGTCGGCCAA TCCCTTCTTT
GGCCTACACG CCTCGATCAC CCGCCAGGAT CACGCCAATA AGCCCGAGCA GGGCTGGTAT
CCCGGCGAGA AGATGAGCCT CATCGAGGCA CTAAATAGCT TTACCCATGA CGCCGCCTAC
GCCGCCCATC AGGAAACCCA GATAGGCGAA CTGCTGCCCG GCATGAAGGC CGACTTCATC
CTGCTTGAGA ACAACCCCTT CACCATGGAC CCGCAGCAGC TATGGCAAAC TCAGGTGAAC
CAGACTTGGG TCAATGGCAA GAAGGTGTTC GACATCCAGA GTAGCCGTTA G
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| Protein sequence | MNTLTKVSLA IDLLFSGSAL AQTTLIHNLK GYTLEQGKLT QFSAIAFSGD KIEKIYQQPP
NELQTQSTNV KVIDAKGQTM LPGLIDAHGH VLGWGLNLIR VDLKGSESEQ AAVARVQAFR
KQNRDLNWVL GRGWNQVLWP EKSFPTAKTL DKVFPDTPVW LRRVDGHAGW ANSAAMKLAG
INGDTQAPSG GEIIRDDKGQ PSGVFIDNAM ALIEQQIPAL TQAEQARVLR AAMTDLARLG
LTSVHDAGVG HDTLAAYRQL ADDKQMPIRI YAMVAADDSQ FDKTLAKGPY RHPGSMLDIS
SVKISADGAL GSRGAALLQD YSDLHGHKGL LLYKEDELKA LMLKSMQAGF QVNTHAIGDR
ANKLVLDDYQ SLIAKTHTKA LRHRVEHAQI LQLSDIPRFA ELGVIASMQA THATSDMNMA
EDRVGPQRIK GAYAWRKLLD SGAVIAAGSD FPIESANPFF GLHASITRQD HANKPEQGWY
PGEKMSLIEA LNSFTHDAAY AAHQETQIGE LLPGMKADFI LLENNPFTMD PQQLWQTQVN
QTWVNGKKVF DIQSSR
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