| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2983 |
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| Symbol | |
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| ID | 4923824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3539414 |
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| End bp | 3540067 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164593 |
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| Product | Tat pathway signal sequence domain-containing protein |
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| Protein accession | YP_001095108 |
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| Protein GI | 127513911 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATGGG CAATAAAACA GACAGATCTA GTGAGCAAAC GGGAGATTAA GTTGGCGAGG
AGTAGGCGCG AAGCAAATAG ACAGTATGCC TTCGAAAGCG GCCTGACCCG GCGCGACTTT
CTTGTGCGCA GCGGCGCCCT GGGCCTGCTG CTGGCGGCGA AGCCTGAGTT GAGCCTTGCC
GGCGACGAAG GCTTTTCTCT CACCACACGA CCCAAAGATT TCGACGTGAT CAACCGCGCC
GTCATAGAGA GCGTGCAGCT GCACCTGTTT CCCGACGATG GTGATGGCCC TTCGGCTAAG
GAGCTGAACG CCTACCGCTA TCTGCTGTGG GCCATGGAAG ATCCTGACAA TCGCGCCGAT
GAGGACAGGC TGTTCATCTT GCAGGGGGCG GCCTGGTTGG AAGATTGGGC CGATACCCAG
ACAGGACGCA GCTTCCTGGT GCTGAACTGG GATGAGCAGG AGGCATTGCT AAAGGCGATC
GCCAAGAGCC GCGCAGGTGA AAACTGGCTT TCCCTGCTGC TCTATTACCT GATTGAGGCA
TTAATGTTAG ATCCACTCTA CGGCGGTAAC CCGGATGAGA TTGGCTGGCG TTGGCTCGAG
CATCAGCCAG GCTTTCCACG GCCCGTGACG GGTAAGAGTT ATCTGGATTT TTAA
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| Protein sequence | MSWAIKQTDL VSKREIKLAR SRREANRQYA FESGLTRRDF LVRSGALGLL LAAKPELSLA
GDEGFSLTTR PKDFDVINRA VIESVQLHLF PDDGDGPSAK ELNAYRYLLW AMEDPDNRAD
EDRLFILQGA AWLEDWADTQ TGRSFLVLNW DEQEALLKAI AKSRAGENWL SLLLYYLIEA
LMLDPLYGGN PDEIGWRWLE HQPGFPRPVT GKSYLDF
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