| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2959 |
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| Symbol | |
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| ID | 4924053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3506843 |
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| End bp | 3507763 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640164569 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001095084 |
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| Protein GI | 127513887 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTAC GACACTTAAG GCACTTCATT GTTCTGGCAA GGTTGAAGAG TTTTAGCAAG
GCAGCCAATG AGCTGCACCT AGCTCAGCCT TCATTATCTC GCAGTATTCA GAAGATGGAG
GAGCGTCTGG GGGCCAGCCT GCTGGCCAGA GATGAGAAGC ATTTTGCCCT GACCGAATAT
GGCCGCTTGG TATTGGCTCA GGGGGAGTTG ATCGTCAGCC AACTCGAATA CTTGGAATCT
GAGATCAAAA CCAAACAGGG GCTGGAAAAG GCCAAGCTGG TCATCGGCGC CAGCCCCATT
CCGTCCAACA GTATTATTGG CCCTGCGGTA GGCAGGTTTA TCCGCGATAA CCCGGATATC
TCTCTGGAGT TAAAGGTCGA GAGTTGGAGC CGACTCTACA AGCTGTTGCT TAAGGGGGAA
CTCGACATGT TCATCGCCGA GACTAATGCC ACCTTACTGG ATCAGCGAGA CAATGTAATC
ACGCAGTGCC TGCCTCAGTC CCAGGCCATT TTCTGCTGCC GCCCCCATCA TCCACTGACT
CGTCTGAAAA CCGTCTACTT ACCTAGTCTG CGCGATTACC CTGTGGGCAT GCCCAGTGCC
ATGCCTCAGC TGTTGAGGCA AAGATTTGAG GATCTGTTTG AGGAAGACAG ACATGACTTC
GTGGGCTTGG TGAAGTATGC CCAGTTTCAG CCGATCAAGT CGGCCATAAA AGAGTGTGAC
ATGGTGGTGA TTACCCCTGA TATTTCGGTG CGCGAGGAGC TGGCATCGGG AGAACTGGTG
GCTCTGGATG TGGTGGGGGT ACCGAATATC AAGGCGAGCT TTAGTGTGGT ATCGATGAAG
AATCGTCGCT TGAGCCACAG CGCCGAGCAG TTTGTCGACT CCTTACTGAC CCACTCTTCC
GCCAAGGCGG TTGGTTTTTA G
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| Protein sequence | MELRHLRHFI VLARLKSFSK AANELHLAQP SLSRSIQKME ERLGASLLAR DEKHFALTEY
GRLVLAQGEL IVSQLEYLES EIKTKQGLEK AKLVIGASPI PSNSIIGPAV GRFIRDNPDI
SLELKVESWS RLYKLLLKGE LDMFIAETNA TLLDQRDNVI TQCLPQSQAI FCCRPHHPLT
RLKTVYLPSL RDYPVGMPSA MPQLLRQRFE DLFEEDRHDF VGLVKYAQFQ PIKSAIKECD
MVVITPDISV REELASGELV ALDVVGVPNI KASFSVVSMK NRRLSHSAEQ FVDSLLTHSS
AKAVGF
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