| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2925 |
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| Symbol | |
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| ID | 4921185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3464142 |
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| End bp | 3464615 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640164530 |
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| Product | putative metalloprotease |
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| Protein accession | YP_001095050 |
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| Protein GI | 127513853 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00599548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGCCTG ATAGCCCAAT AGCACTGCAC CTGGATCTAC AAGTTGCGAC CCAGGCCGAA
CAATTGCCGA GCCAGGAAGA GTTCGAGTCT TGGGTACGTC TGGCTCTAGG CAACGTCATG
CCCGAGGCCG AGATGACCAT ACGCCTGGTG GATGAGGCTG AAAGTCAGCA GTTAAATCAT
ACCTATAGAG GCAAAGACAA GCCGACAAAT GTGCTATCAT TCCCGTTCGA GTCGCCACCT
GAGGTTGAAC TGCCCCTGCT GGGCGACTTA GTTATCTGTG TGCCTGTGGT CGAGCAGGAG
GCTGAGATCC AAGGAAAAAG CCTTACAGCC CACTGGGCCC ACATGGTTGT ACATGGTTGT
CTGCATCTGC TAGGGTATGA TCATATTATC GATAGCGAAG CAGAAGAAAT GGAGTCTTTA
GAGACTCAAC TTATTGAAAG TTTGGGATTT CCCAATCCTT ACAAGGAGCA ATAG
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| Protein sequence | MMPDSPIALH LDLQVATQAE QLPSQEEFES WVRLALGNVM PEAEMTIRLV DEAESQQLNH
TYRGKDKPTN VLSFPFESPP EVELPLLGDL VICVPVVEQE AEIQGKSLTA HWAHMVVHGC
LHLLGYDHII DSEAEEMESL ETQLIESLGF PNPYKEQ
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