| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2908 |
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| Symbol | |
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| ID | 4921369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3447269 |
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| End bp | 3448204 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164505 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001095033 |
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| Protein GI | 127513836 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.888378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATTATC TGCATTGGGA GATGAAATCT GTGCATAAAG GTTTGTATCA TGTTGATTTA
AATCTTCTTA AGTTGTTTCA TTCGCTCTAT TGCTGTCGCA GTGTAACCCA AGCGGCGCAG
CAGATGCATC TGAGTCAGTC GGCGTTTAGT CACGCGCTCT CCAGGCTACG CCAGCAATTG
GATGACCCAC TGTTTATCCG CTCGGCCAGC GCGATGCTCC CAACTCCCTA TGCCGACTCC
ATCAGCGTCG AGGTCGGCCA GGTGCTGGAC AGGCTCAGCG ACTGCCTATT ACCCAAACAG
GCATTTTCTC CGGTGCAGAG TCAGCATGCA TTTCGCATTG CGGTGACTGA CTTTACCGCC
CTGATGTTAA TGTCGCGTCT TGCCAAGCGG CTCAGCACCC TGGCGCCCAA GGTGCGCCTC
AATCTGATTC ACGATGAGCA GCGTATGCCC CTGAGCCGTT TCGAGTCGGG TCAATTGGAT
TTCGCCTTGG ACTTCTCCCA TGACGAGGGC CAGGGTCACA GACTCATCAG CGAGTCCCTA
TGGTGGGAGG GAGACTATTG CACCCTGGCA AGCTCCAAGG TGACTAAGAT GAACCGTGAC
ATCTTTCTCG CCAGTCGGCA TATCCTGGTT TCCCCCTGGG GAACTGATAC AGGGATAGTG
GATCAGGTAC TTGCCTCACA GGGGCTGAGC CGGGATATCG CCATACAGCT GCCAAATGTC
ATCAACGCGC CATTTCTGGT GGAGGAGTCG GGGTATCTGG TGACCCTGCC GCGTCAGGCG
GCGCGCCTGC TTGCCCATAG CCTACCGCTC AATGAGTTCG ACGTCCCTCT GCCTATGCCA
AGCTACAAGT TGACGTTGAT GAGTTATAAG CCGACCGAAA ACACCTCAGA AAACCTTTGG
CTGAGGGAGC AGATAAACGA GCTGTTCGAC ACCTGA
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| Protein sequence | MHYLHWEMKS VHKGLYHVDL NLLKLFHSLY CCRSVTQAAQ QMHLSQSAFS HALSRLRQQL
DDPLFIRSAS AMLPTPYADS ISVEVGQVLD RLSDCLLPKQ AFSPVQSQHA FRIAVTDFTA
LMLMSRLAKR LSTLAPKVRL NLIHDEQRMP LSRFESGQLD FALDFSHDEG QGHRLISESL
WWEGDYCTLA SSKVTKMNRD IFLASRHILV SPWGTDTGIV DQVLASQGLS RDIAIQLPNV
INAPFLVEES GYLVTLPRQA ARLLAHSLPL NEFDVPLPMP SYKLTLMSYK PTENTSENLW
LREQINELFD T
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