| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2866 |
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| Symbol | |
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| ID | 4922245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3398900 |
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| End bp | 3400609 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164463 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001094991 |
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| Protein GI | 127513794 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGC AAACCTATCT CCAACAGGTC AAAGCACTCC AAGCGGCAAG ATGGCCCAAA
GGCACAACGC GGGAACCCAT CTATCCTCAT GGCGAAAAGC CGGTCACCGA GTATCTCTCT
GCCTGGGCGA GACTCAACCC TACCAAGGTG GCCATCCAGT TCTACGGCTA TGAGCTGACC
TACGCCCAGT TGGATGAGAT GAGCACCCGC TTTGCCAACG TCCTCAGAGG ACTTGGCGTG
GGCCAGGGTG ACGGTGTTGC CGTGTTCATG CCCAACTGCC CGCAGTTTCA CATCGCCTTT
CTCGGCATCT TAAAGTGCGG CGCCGTGCAC ATGCCGGTGA GCCCACTGTC GAAAGAGATG
GAACTACGCC ACCAGCTGGG TGACAGTCAA CCTAAGGTCG CCCTATGCTA CGACGCCCTG
CTGCCCACCA TGCGTCCCGT CTGCCAGGAG CTGGGCATAG AGCACATCAT CACCACCAGC
TATACCGATG TCAGGCCCCG CGCCATCACC GCCGTGCTGC CTGATCTGTT TGAGATCCCC
AAGACCCCCT TGGCAGATGG CATTATCGAT TTCTTCGAGG CGATAGATAA CGCGTCTAAG
GAAGTGCTGG ACTATATCCC GGCGCTGGAC GATCTTGCGG CCATCAACTA CACCAGCGGC
ACCACTGGCA TGCCCAAGGG CGTGATGCAC ACCCACCGCA ACATGATAGG CACCATGGCC
TCTTACTATC CGGTCACCTT TGGCGAGGTC GGCCCCGAAG GCACAGATCT GGTGATGCTC
AGCTTCCTGC CAGAGTTCTG GATTGCCGGC GAAGACACAG GCTTACTGCT CCCCCTGTAT
TCGGGCGCGA CTCTGGTGTT GATGGCCCGC TGGGACACCA AGGCCTTTAT GGAGCTGGTA
CACCACCACA AGGTCAATAT GACCATCATG CTGATAGACA GCGTGGATGA GATCCTCAAC
CACCCTCATC TCCACCAATT CGACCTCACC TCGCTGACCA CAGTGCCCTG CATCTCCTTC
ATCAAGAAAC TCAACCGAGA CTACCGTCAA CGTTGGCGCG AGCTGACCGG CACCACACTG
TTCGAGGTGG CCTATGGCAT GACAGAGACC CACACCTGTG ACACCTTCAC CCGCGGCTTC
CAGGTGGACG ACATGGATCT CTCCTTCGAC CCGGCATTCC TTGGCCTGCC CGTGCCCGGC
ACAGAGATCA AGATCTGCGA CTTTGTCACC GGCGAGCTCA TGCCCCTGGG CGTGGAAGGC
GAGATTCAGA TCCGCACCCC TACCCTGCTC AAGGGTTACT GGAATAAGCC AGATCTGAAC
AAAAACCTGT TTGAAGAGGG TGGCTGGTAC CGCACCGGCG ACCTGGGAAT GATCACCGAG
GAAGGCTTCT TCCGTTATCT GGGCCGCCGC AAGGAGATGC TCAAGGTCAA CGGCATGAGC
GTATTCCCCA CCGAGGTGGA AAGCATGCTA GGCCAACATC CGGCCATCGC CTCATGCGGC
GTCGTCGGTC GCCCCGACGA GCGCAAGGGG CAGGTGCCCG TGGCCTTCGT TACCCTAAAG
CCGGGCTTCG ATGAAACCCA AGAGTCCCTG CAGGCCTGGT GTGTGAATGC CATGGCCATC
TTCAAGGTGC CGGAGATCCG CATCCAGGAG AGATTACCTA TGACCGCCAC CGGCAAGATC
CGTAAGGTGG ATCTGGAGAA AAGTTTATGA
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| Protein sequence | MNEQTYLQQV KALQAARWPK GTTREPIYPH GEKPVTEYLS AWARLNPTKV AIQFYGYELT
YAQLDEMSTR FANVLRGLGV GQGDGVAVFM PNCPQFHIAF LGILKCGAVH MPVSPLSKEM
ELRHQLGDSQ PKVALCYDAL LPTMRPVCQE LGIEHIITTS YTDVRPRAIT AVLPDLFEIP
KTPLADGIID FFEAIDNASK EVLDYIPALD DLAAINYTSG TTGMPKGVMH THRNMIGTMA
SYYPVTFGEV GPEGTDLVML SFLPEFWIAG EDTGLLLPLY SGATLVLMAR WDTKAFMELV
HHHKVNMTIM LIDSVDEILN HPHLHQFDLT SLTTVPCISF IKKLNRDYRQ RWRELTGTTL
FEVAYGMTET HTCDTFTRGF QVDDMDLSFD PAFLGLPVPG TEIKICDFVT GELMPLGVEG
EIQIRTPTLL KGYWNKPDLN KNLFEEGGWY RTGDLGMITE EGFFRYLGRR KEMLKVNGMS
VFPTEVESML GQHPAIASCG VVGRPDERKG QVPVAFVTLK PGFDETQESL QAWCVNAMAI
FKVPEIRIQE RLPMTATGKI RKVDLEKSL
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