| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2805 |
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| Symbol | |
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| ID | 4922539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3323306 |
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| End bp | 3324391 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640164400 |
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| Product | choloylglycine hydrolase |
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| Protein accession | YP_001094930 |
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| Protein GI | 127513733 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3049] Penicillin V acylase and related amidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00160051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAT CAATCGTCGC AGCCAGCATC GTCGCGCTTA TGACTATCGG TGCAGTACAA
ACCGCTTCAG CTTGCTCTAG CGTTTCGGCC ACCACAGACT ATGGCACGCT AGTCGCCCGC
TCACTAGACT GGGATGTTCA CGTAGAAGCT CGCGCCAAGA TCATTCCAGC TGGCATAGAA
ATCAGCTCCA AGGCGCCTAG CTACAAGACT CAGGCCACTT GGACCACCAA GTACAAGTCA
ATGTCACTGT CTGACAACCC TATCTTCCAT GGCACTGCCT ACGATGCCAT CAACGATCAA
GGCCTGTCGG TACATGGTCA GTATCAGGAA GCCAGCAAGC CGTTCCTGAC GATGCACAAA
GACAATGATA ATGGTGCCCC AGCGGTCAAC AACGGCCTGC TCGCCACCTA CATCACCTCA
AACTACAAAA CCGTTGCCGA AGCTATCGAC GGTCTCGAAA AAGGCGAATG GCAGCCAGCC
TTCTCGGATC CTATGATGGA CATGGAACAT CTGGTACCCG GTCACTTCAA CCTGCGCGAT
AACGAAGGCA ACGTGGCCCT CATCCAGCTC AACGCAGGTG GTAAGCTGAA GGTATGGCGT
GGCAGCACCA ACGATGAACT GCGCTTCGTC ACCAACGAGC CCCTGTTCCA GGATCACCTG
GAGTTCTCTA AGACGATCGA CCGCAGTGCG CTGGGCACCA AACTCCCTGC AGATTACTCG
CCACTGTCAC GTTATGTGCG CGGCCTGCAC CATGCAGAGA GCCAGGACTT CAAGAACATG
ACCTATCAGC AGACTATGGC GGCGCAGCTA CTGGCCTTCC ACAGCGCGGT AGCCATCCCA
CAATCAGTCC AGGCACCTTT CGTCGATGGT CCTAAGATTG CGGAAGAAGG CGGCGTGTTC
CCAACCTTCT TCACCGTACA GTACAACCTG AAGAACGGCG ACACCGTCTA CTCAGACCTG
TATGAAGGCC ATCAGATCAA GTTCAACTTC GCAGAGGTTA GCGTTGGCAA AGAGCCGGTC
TGTGCAAACC TCTCAGTCGA TGCTCACGAA GGTCGCGCCG CACCAACCTT TGGCAAGTGT
AGCTAA
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| Protein sequence | MKKSIVAASI VALMTIGAVQ TASACSSVSA TTDYGTLVAR SLDWDVHVEA RAKIIPAGIE
ISSKAPSYKT QATWTTKYKS MSLSDNPIFH GTAYDAINDQ GLSVHGQYQE ASKPFLTMHK
DNDNGAPAVN NGLLATYITS NYKTVAEAID GLEKGEWQPA FSDPMMDMEH LVPGHFNLRD
NEGNVALIQL NAGGKLKVWR GSTNDELRFV TNEPLFQDHL EFSKTIDRSA LGTKLPADYS
PLSRYVRGLH HAESQDFKNM TYQQTMAAQL LAFHSAVAIP QSVQAPFVDG PKIAEEGGVF
PTFFTVQYNL KNGDTVYSDL YEGHQIKFNF AEVSVGKEPV CANLSVDAHE GRAAPTFGKC
S
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