Gene Shew_2767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2767 
SymbolmotB 
ID4922762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3272510 
End bp3273454 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content58% 
IMG OID640164362 
Productflagellar motor protein MotB 
Protein accessionYP_001094892 
Protein GI127513695 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.400451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA AGGTCAAATG CGATTGCCCG CCCGCCGGGG CGCCCATGTG GTTGGCAACC 
TTTGCCGACC TCATGTCGCT ATTGATGTGT TTCTTCGTAT TGCTGCTCGC CTTCTCCGAG
ATGGACGTGA TGAAGTTTAA GCAGATCGCA GGGTCGATGA AGTATGCCTT CGGTGTGCAG
AATAAGGTTG AAGTCAAAGA TATTCCCAAG GGCACCTCGG TGATCGCACT GGAGTTTCGC
CCAGGCAAGC CAGAACCCAC TCCCATCGAG ATCATCAATC AGCAGACTAA CGAGATGACC
GAGCCCACCA TTGAGGTGCA GGCAGGTGAA GACGACAGCG CCGGCGGCGT ACAGCAGCAG
CGCGGTGAGC AGCGCGGTGG CGAGGCGTCA TCGACGGCTC AGGAAGAGGC TGATTCTGAA
GCTCAGGCGA AGCAACAGCA GCAGGAGGCC GCGTCACAGG ATCAGATCAA TGATCGGGTG
AAGAAGATGG CGCAGGAGCT CAACAAGGAG ATCGTCGACG GGGCGATCGA GATTGAGTCC
TTGGGGCAAC AGATCATCAT ACGTATCCGA GAGAAGGGCG CCTTCTCATC GGGCTCTGGC
TTCCTACAGC CTAGGTTTAA GCCGGTGATC CGCCGTGTGG GCGAGCTGCT CAAGGATGTG
CCGGGGATCA TTACCGTATC CGGTCACACG GATGATATGA ATATCAGCAA CGAACTCTAT
AGCTCCAACT GGGATCTCTC CAGTAAACGC GCCGTGGCCG TGGCCCATGA GCTGGTGCGT
GTGCCGGGCT TCGACCAGCA GCGGATGAAG GTGGTGGGCA TGGCCAGCAC GGCGCCGTTG
GTGCCGAACG ATTCGGCAGC CAACCGCGCC CGAAATCGCC GGGTCGAAAT TGCCATCGAG
CAGGGCAAGC CGAAAGAGTC AGACGAGATT CAAGTGGAGC AGTAG
 
Protein sequence
MAKKVKCDCP PAGAPMWLAT FADLMSLLMC FFVLLLAFSE MDVMKFKQIA GSMKYAFGVQ 
NKVEVKDIPK GTSVIALEFR PGKPEPTPIE IINQQTNEMT EPTIEVQAGE DDSAGGVQQQ
RGEQRGGEAS STAQEEADSE AQAKQQQQEA ASQDQINDRV KKMAQELNKE IVDGAIEIES
LGQQIIIRIR EKGAFSSGSG FLQPRFKPVI RRVGELLKDV PGIITVSGHT DDMNISNELY
SSNWDLSSKR AVAVAHELVR VPGFDQQRMK VVGMASTAPL VPNDSAANRA RNRRVEIAIE
QGKPKESDEI QVEQ