Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2767 |
Symbol | motB |
ID | 4922762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 3272510 |
End bp | 3273454 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640164362 |
Product | flagellar motor protein MotB |
Protein accession | YP_001094892 |
Protein GI | 127513695 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.400451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAGA AGGTCAAATG CGATTGCCCG CCCGCCGGGG CGCCCATGTG GTTGGCAACC TTTGCCGACC TCATGTCGCT ATTGATGTGT TTCTTCGTAT TGCTGCTCGC CTTCTCCGAG ATGGACGTGA TGAAGTTTAA GCAGATCGCA GGGTCGATGA AGTATGCCTT CGGTGTGCAG AATAAGGTTG AAGTCAAAGA TATTCCCAAG GGCACCTCGG TGATCGCACT GGAGTTTCGC CCAGGCAAGC CAGAACCCAC TCCCATCGAG ATCATCAATC AGCAGACTAA CGAGATGACC GAGCCCACCA TTGAGGTGCA GGCAGGTGAA GACGACAGCG CCGGCGGCGT ACAGCAGCAG CGCGGTGAGC AGCGCGGTGG CGAGGCGTCA TCGACGGCTC AGGAAGAGGC TGATTCTGAA GCTCAGGCGA AGCAACAGCA GCAGGAGGCC GCGTCACAGG ATCAGATCAA TGATCGGGTG AAGAAGATGG CGCAGGAGCT CAACAAGGAG ATCGTCGACG GGGCGATCGA GATTGAGTCC TTGGGGCAAC AGATCATCAT ACGTATCCGA GAGAAGGGCG CCTTCTCATC GGGCTCTGGC TTCCTACAGC CTAGGTTTAA GCCGGTGATC CGCCGTGTGG GCGAGCTGCT CAAGGATGTG CCGGGGATCA TTACCGTATC CGGTCACACG GATGATATGA ATATCAGCAA CGAACTCTAT AGCTCCAACT GGGATCTCTC CAGTAAACGC GCCGTGGCCG TGGCCCATGA GCTGGTGCGT GTGCCGGGCT TCGACCAGCA GCGGATGAAG GTGGTGGGCA TGGCCAGCAC GGCGCCGTTG GTGCCGAACG ATTCGGCAGC CAACCGCGCC CGAAATCGCC GGGTCGAAAT TGCCATCGAG CAGGGCAAGC CGAAAGAGTC AGACGAGATT CAAGTGGAGC AGTAG
|
Protein sequence | MAKKVKCDCP PAGAPMWLAT FADLMSLLMC FFVLLLAFSE MDVMKFKQIA GSMKYAFGVQ NKVEVKDIPK GTSVIALEFR PGKPEPTPIE IINQQTNEMT EPTIEVQAGE DDSAGGVQQQ RGEQRGGEAS STAQEEADSE AQAKQQQQEA ASQDQINDRV KKMAQELNKE IVDGAIEIES LGQQIIIRIR EKGAFSSGSG FLQPRFKPVI RRVGELLKDV PGIITVSGHT DDMNISNELY SSNWDLSSKR AVAVAHELVR VPGFDQQRMK VVGMASTAPL VPNDSAANRA RNRRVEIAIE QGKPKESDEI QVEQ
|
| |