| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2711 |
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| Symbol | |
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| ID | 4922941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3208607 |
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| End bp | 3209395 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640164306 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001094836 |
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| Protein GI | 127513639 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000615291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATGCACA GGCAAGAGAT CGAACATATC CCCGTCTTTG GCTCGCCATC TCAGCTATTT
AAGCCGGTTG CTCGGGAGTA TTCAGATGGC CAACTACTGG CGCCCCATTG GCACCACGCC
GCGCAACTGA TTTACGCCGA ATCCGGTGTG ATGGAACTGA GCTGCGAGGA GAGTTTTTGG
ATAATCTCGC CTCAGCAAGC GCTGTGGATG CCTGCCGAGC TGCCCCACAG ACTCAAGGCC
CGAGGCCAAG TCAGTCTGCG TAGCGTCTAT TTTCAACCAG ATGCCCTGCC CGAGCGCTTC
TCCAAGCAGC CCCAAAGTCT GGTGGTCAGC CCCCTGCTTA GAGAGCTGAT GAAGAGTGCG
ATGCCTGTGA CCAGCAGCAG CCAACCCAGC AGCAGAGAGG TGCACCTTAT GCAACTTCTG
ATGAGCGAGA TCGGCTGGGC ACAAGAGATC CCCTTGAAGC TCCCCATGCC AAAAGATAAC
CGGCTGCAGA AGATCTGCCT AGGCTTGCTC GCAGATCCCG GCAACGACTG CACGCTTAGC
CAATGGGGGG AGATAGTCGG CGCATCACCC AGAACCTTGT CCCGGCTATT TCAAACCCAG
CTGGGGACGA GCTTCGCCAT TTGGCGTCAA CAGGCCAGAA TATTCGCCGC CATCCCCAGG
CTAAATCTCG GCGAGCCCAT AGTACGGGTG GCGATGGAGA TGGGCTATGA TTCTGCCGGC
GCCTTCGCAT CGGCATTTAA AAAGATGATG GGAGTCACCC CGAGCGAGTT TCGCACGCAA
GTTGTCTGA
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| Protein sequence | MMHRQEIEHI PVFGSPSQLF KPVAREYSDG QLLAPHWHHA AQLIYAESGV MELSCEESFW
IISPQQALWM PAELPHRLKA RGQVSLRSVY FQPDALPERF SKQPQSLVVS PLLRELMKSA
MPVTSSSQPS SREVHLMQLL MSEIGWAQEI PLKLPMPKDN RLQKICLGLL ADPGNDCTLS
QWGEIVGASP RTLSRLFQTQ LGTSFAIWRQ QARIFAAIPR LNLGEPIVRV AMEMGYDSAG
AFASAFKKMM GVTPSEFRTQ VV
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