| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2691 |
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| Symbol | |
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| ID | 4923200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3186780 |
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| End bp | 3187310 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640164286 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_001094816 |
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| Protein GI | 127513619 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000018652 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.171772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGCG CATCTATGCT GGCACTGTGT TTGGCGAGTC TTATCGCATC GGGATCTGCG
ATGGCGGTTG CCGATATTAA GGGGTATTAC CTGGGGGCCA TGGCGGGTCA TTCCACGCTA
GAGGCGGGAG AATTTGACGA GTCGGCCATC AGTTATGGTC TCTATGGCGG TTACTATTTC
AGTAAAAACT TCGCCGTCGA GAGCACCTAT GTTCGCACCG ACAACTTTGT CGATGTGGGG
GATGTGAAGG CCAATCAGCT GTCTATCGCG GCCAAGTTCC ACCACTATTT CAATAATACT
TACTCTATGT TCATCAAGGC GGGTATGGCG GCTACTAAGG TCGAGGCCGA TCTGGACTAT
GACGGCAATG GCTGGCTGTG GGGCACTGGC TTTAACATGG CTTTCGACAA TGGCATTAAC
GTGCGTATTG CCTATGAGAT GCTCTATACC GATCTCGATG CGACCGGGCT CGATGAGCAG
GTGGAAAGCG ACTGGGGTAA TGTCTATCTA GGCGTGCATT ATCAGTTTTA G
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| Protein sequence | MKRASMLALC LASLIASGSA MAVADIKGYY LGAMAGHSTL EAGEFDESAI SYGLYGGYYF
SKNFAVESTY VRTDNFVDVG DVKANQLSIA AKFHHYFNNT YSMFIKAGMA ATKVEADLDY
DGNGWLWGTG FNMAFDNGIN VRIAYEMLYT DLDATGLDEQ VESDWGNVYL GVHYQF
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