Gene Shew_2661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2661 
Symbol 
ID4923313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3135394 
End bp3136206 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content56% 
IMG OID640164256 
Producthypothetical protein 
Protein accessionYP_001094786 
Protein GI127513589 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAT CGAGACCTTG GTTAGCGGGC ATGCTAGGCC TTGCCCTGGT GTGTATGGCA 
CCTATTTCAG CGACAGCCGA GACTCTGGCT ACTGAGACTG CGGTTATAAA TAGTAGCGAC
GCCCTGGAGG CGCGCGAGAT AGTGCGCCGC GCCGACGAGC AGATGCGCGG TAAGTCCAGC
TATGTGGTGG CGACCATGAA TATCGTGCGT CCGGCCTGGA CGCGCTCCAT GAGCATGAAG
AGCTGGACCA AGGGGCAGGA GCTGTCGCTG GTACTGGTGA CGGCGCCGGC GAAAGACAAG
GGCAGCGTGT CTCTCAAACG CTACCGCGAG ATGTGGAACT GGGTGCCCGC CATCGAGCGC
ATCATCAAGA TAGCTCCCTC CATGTTGAGT CAGTCTTGGA TGGGCTCAGA CTTCACCAAT
GACGATCTTA TCAATCAGTC CTCCATAGTG GTCGATTATC GCCATCAGCT GGTGCAGCAC
GAATCGATAG AGGGGGATGA CTGCTTCGTC ATCGATGCCT TTGCCAAGCC TGACGCGCCA
GTGGTCTGGA GCCGTATCCG TCTTTGGATC TCGAGTCGCC ATTATTTGCA GCGTAAAGTG
GAATTTTTCG ACGAGTTCGA TGAGCAGGTA AACACCCTGA CCACCTCGGG TATTCAGGAG
ATGGGCGGGC GTATGTTGGC CACCAAGATG GTGATGATCC CGGCCGATAA ACCGGGGCAG
CGCACCGAGC TTATCACCCA TGAGGCGGCA TTTGATTTTG AGATAGGTGA TGATTTCTTC
TCTCAGCAGC AGATGAAGGC GCTGCGGGAC TAA
 
Protein sequence
MDGSRPWLAG MLGLALVCMA PISATAETLA TETAVINSSD ALEAREIVRR ADEQMRGKSS 
YVVATMNIVR PAWTRSMSMK SWTKGQELSL VLVTAPAKDK GSVSLKRYRE MWNWVPAIER
IIKIAPSMLS QSWMGSDFTN DDLINQSSIV VDYRHQLVQH ESIEGDDCFV IDAFAKPDAP
VVWSRIRLWI SSRHYLQRKV EFFDEFDEQV NTLTTSGIQE MGGRMLATKM VMIPADKPGQ
RTELITHEAA FDFEIGDDFF SQQQMKALRD