| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2616 |
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| Symbol | |
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| ID | 4920715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3086492 |
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| End bp | 3087169 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640164210 |
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| Product | GDSL family lipase |
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| Protein accession | YP_001094741 |
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| Protein GI | 127513544 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGC TGTGGGTCAA GTGGCGCACG CCAAGGCTGC CCGAGCCTGA TGGTGAACGC
AGTGGTGAGT TGGGGGAAGG GAAGCCGCTT AGGCTGTTGA TTCTAGGGGA CTCGGCCGCG
GCGGGCGTCG GCGTCTCCCA CCAAGACAAG GCCCTGAGCG GTCAGCTCAC TCGTCTGTTG
GCGCCTCACT ATCGCCTTAA CTGGTGCTTA CATGCCAAGT CGGGCATGAC CACGGCTCAG
ACGCTCAAGT TTGTCCAGCA GGCACCAAAT GGGGTCGATG TCATTCTTAT CTCTCTGGGG
GTCAACGATC TGCTCTCGCC CATCGACGTG CAGCGCTGGC TCGCCTCGAC CGGCGCGCTG
ATAGGCGGTT TACTTGAGGC CTCACCCGGC GCAATGGTGC TGCTGACGCC GCTGCCGCCC
CTGGGGAACT TTCCGAGGTT TAAACAGCCT CTCGCCGGTG TGTTGCGGCG ACGGGAGGCG
CGCTTTAATC GGGCGCTAGA GCAGTTTTGC CAAGAGAAAG CGGCCTGTCA GCTCCTGCCC
CTCATGCTGC CTCTGACGCC AGACGCCCTA GCCAGCGATG GCTTTCACCC CAGTGCGGCC
AGCTATCGTC TGTGGGCGGA ATGCGCCAGT CAGGCGATCC TCGCCCGGCA CCTTATTGAA
GACACGCGTC CAGTCTAG
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| Protein sequence | MQALWVKWRT PRLPEPDGER SGELGEGKPL RLLILGDSAA AGVGVSHQDK ALSGQLTRLL
APHYRLNWCL HAKSGMTTAQ TLKFVQQAPN GVDVILISLG VNDLLSPIDV QRWLASTGAL
IGGLLEASPG AMVLLTPLPP LGNFPRFKQP LAGVLRRREA RFNRALEQFC QEKAACQLLP
LMLPLTPDAL ASDGFHPSAA SYRLWAECAS QAILARHLIE DTRPV
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