| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2610 |
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| Symbol | |
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| ID | 4920709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3076416 |
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| End bp | 3078383 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164204 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001094735 |
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| Protein GI | 127513538 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGG TAAATAATGC GTCGACGGCG CGGGCCTTCG ACATGGGTTC ACTCGATACC
TTTCCCAAGA TCCTGCGCCA TAATGCGGCC AACTGGGGTA AAGAGATTGC CATGCGCGAG
AAGGAGTTCG GCATCTGGAC CGAATTTAGC TGGCAAGATT ATCACAACCG GGTGAAGTGG
ATGGCGCTGG CCTTCGACCA CCTGGGCATC AAATCGCACA GCACCATAGC CTTGCTGGGC
GAGAACCGTC CCGAGTGGGT CTGGGGCGAA GTGGCGGCCC ATGCGCTGGC TTGCTTTTCC
TTGGGGATTT ATCAAGACTC GCTGCACGAA GAGGTGGCCT ACCTGCTTAA CCGCAGCGAG
GCCCAGGTGA TCGTCGCCGA AGATGAGGAG CAGTGCGACA AGCTGCTGGA GCTGGGCGAC
AGCATCCCCT CGGTGAAATA TATCGTCTAC TGTGACCCTC GCGGCATGCG CAAGTACGAC
GACCCACGTC TTATCAGCGT CGAAGAGATC TATCGTCTCG GCCAAGAGGT GGATAACACC
CAGCCGCGCC ACTACGACAA CCTGGTGGAT GCGGGCAAGG CCGAGAACAT CGCCATCTAC
TGCACCACCT CGGGCACCAC CTCTAAACCT AAGATTGTCT TGCTGCAGGG CAGTAAGTTT
ATCGACCATT GCTGCTCTTA TCTGCGGGCC GATCCCCGCG CGCCGGGAGA CAACTATGTC
TCCGTGCTGC CGCTGCCCTG GATCATGGAG CAGGTCTACG CCGTGGGCCA GGCGCTCATT
GCCCGTCAGA TCGTCAACTT CGTCGAAGAG CAGGAAACCA TGATGGCGGA TCTGCGCGAG
ATAGGCCCAA GCTTCGTCTT GCTGGCCCCA AGGGTGTGGG AAGGGATCCT CGCCGATGTG
AAGGCGCGCA TGATGGACTC GACCCCGCTC AAGCAGAAGT TGTTCGATTT TGCTATGAAG
CGCGCCGAGC AGCGACTTGC CGAGGGCAGA CGCTCTAAGC TGGCCGACAT CATCTTGATG
AAGGCGCTGC GCGACCGTCT AGGGTTTTCC TTCCTCAAGT CGGCGGCTAC CGGCGGCGCG
GCCATGGGGC CGGATACCTT CAAGTTCTTC CAGGCGATCG GCGTGCCGCT GCGTCAGCTC
TATGGCCAGA CCGAGATGTG CGGCGCCTAC ACCATACACG ACGAACATGA CGTGGATTAC
GACACCGTGG GCGTGGCCTT CGATACCGCC GAGCTTAAGG TGATCAACAC CGACAGCGAA
GGGGTGGGCG AGGTGATCGC CAGAACCGTG GGCATGTTCA ACGGCTATCT GGGCGATCAG
ACGGCCTATG ATGAAGATGT CAAAGATGGC TGGATGCACA CGGGGGATGC CGGTTATTTC
AAGCCCTCGG GCCACCTGGT GGTGATCGAC CGCATCAAAG ATCTGGCCAA GACCAGCCAG
GGCATTCAGT ACTCGCCGCA ATATATCGAG AACAAGCTTA AGTTCTCCTC CTTCATCGGT
GAGGCGGTGA TCTTAGGTAA GGACAAGCCC TATCTGTCGG CCATCCTCTG TATCCGTTTC
AGCATCGTCT CCAAGTGGGC CGAGCAGCAG GGACTGGCCT TCACCAACTA CACCAACCTG
TCGAGTCTGC CAGAGGTGTA TCAGCAGCTA CAGGCCGAGG TGGAGCGGGT GAACGAGACC
CTGCCCGATG CGCAGAAGAT CAACAAGTTT ATCTTGCTTT ACAAGGAGCT GGACGCCGAT
GACGGCGAGC TGACCCGTAC CCGTAAGGTG AGACGCGGGG TGATAGCCGA CAAGTATGGC
GAGATCATCG AGGCCATCTA TGGCGACCAG TCCCATGTGG ATATCGACAC AGTGATCACC
TTCCAGGATG GGACTAAGTC GCGCATCCAA ACCCAAGTCA AGGTGGCGAC CGTGATCGCC
CCGCGTCAGT CCATTGAGGG CGAGGCGAGT CAAAGGAGAG CATCATGA
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| Protein sequence | MTQVNNASTA RAFDMGSLDT FPKILRHNAA NWGKEIAMRE KEFGIWTEFS WQDYHNRVKW
MALAFDHLGI KSHSTIALLG ENRPEWVWGE VAAHALACFS LGIYQDSLHE EVAYLLNRSE
AQVIVAEDEE QCDKLLELGD SIPSVKYIVY CDPRGMRKYD DPRLISVEEI YRLGQEVDNT
QPRHYDNLVD AGKAENIAIY CTTSGTTSKP KIVLLQGSKF IDHCCSYLRA DPRAPGDNYV
SVLPLPWIME QVYAVGQALI ARQIVNFVEE QETMMADLRE IGPSFVLLAP RVWEGILADV
KARMMDSTPL KQKLFDFAMK RAEQRLAEGR RSKLADIILM KALRDRLGFS FLKSAATGGA
AMGPDTFKFF QAIGVPLRQL YGQTEMCGAY TIHDEHDVDY DTVGVAFDTA ELKVINTDSE
GVGEVIARTV GMFNGYLGDQ TAYDEDVKDG WMHTGDAGYF KPSGHLVVID RIKDLAKTSQ
GIQYSPQYIE NKLKFSSFIG EAVILGKDKP YLSAILCIRF SIVSKWAEQQ GLAFTNYTNL
SSLPEVYQQL QAEVERVNET LPDAQKINKF ILLYKELDAD DGELTRTRKV RRGVIADKYG
EIIEAIYGDQ SHVDIDTVIT FQDGTKSRIQ TQVKVATVIA PRQSIEGEAS QRRAS
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