Gene Shew_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2598 
Symbol 
ID4920730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp3065072 
End bp3065479 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content45% 
IMG OID640164192 
Producthypothetical protein 
Protein accessionYP_001094723 
Protein GI127513526 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTT TGGTCTTTTT AGCTTTTAGT GTTGCCGCGG AGTCACCAGT TGAGTACCCC 
AAGCCACAGA CGCCCAGTGA ACTTCATGGG TTGTTTGCAC AGTACTTTAA GCACAAAGAT
CTGCAAGGGT TATCGACGCT TTTCGCTGCC GACGCGAAAT TCATTCTCGA TGATAAGGGG
CGGGCCGCCA TTGGCAGAAA AGCCATTGTC AGTGAGTTGG AAAAATATCT AGGGGTCAAA
GGTGAGATGC AGACATTGTC AAAGTCGGTT CATATTAATG GCGATATCGC GTTAGTAAGA
TCTCAATGGA AAATCTCGGG TACAGATTTA AAGGGGACAG CGCTTGAAGT CATGCAATAT
CAAAATAACG GCTGGGTGTA CGTTATAGAT AATCCAAATG GATATTAA
 
Protein sequence
MTALVFLAFS VAAESPVEYP KPQTPSELHG LFAQYFKHKD LQGLSTLFAA DAKFILDDKG 
RAAIGRKAIV SELEKYLGVK GEMQTLSKSV HINGDIALVR SQWKISGTDL KGTALEVMQY
QNNGWVYVID NPNGY