| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2575 |
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| Symbol | |
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| ID | 4921063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 3035225 |
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| End bp | 3035926 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164169 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001094700 |
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| Protein GI | 127513503 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGAC TCAATAAGCT GGTCACCAGC TATGAAGAAG CATTGGAAGG TCTGACAGAC
AACATGACCG TCATGGTCGG TGGCTTCGGC CTCTGCGGTA TTCCCGAAGG CTTGATCGCC
CAGATGGTTA AGAGTGGTGC CAAGGGGCTC ACCGCCATCT CGAACAACGC CGGGGTAGAC
GATTTCGGCC TGGGGCTGCT GCTCAAGAGC CGCCAGATCA GCACCATGAT CGCCTCCTAT
GTGGGTGAGA ACGCCACCTT CGAGCAGCAG ATGCTCTCGG GTGAACTCAA CGTTATCCTC
ACCCCGCAAG GCACGCTAGC CGAGAAGATC CGCGCCGGCG GCGCCGGTAT CCCCGCCTTC
TTCACCGCGA CCGGTTACGG CACCCCTGTG GCCGAAGGCA AGGAGACCCG TGAGATCGAT
GGTCGTCACT ATGTGCTGGA GCCCGCACTG ACCGCAGACT TCGCCCTGGT GCGCGCCTGG
AAGGCCGATA CCATGGGTAA CCTGGTGTTT CGCAAGACGG CGGCTAACTT CAACCCTATG
ATGGCCACGG CCGGTAAGAT CACTGTGGTC GAAGCCGAGC ATATCGTCGA GCCGGGCGAG
CTGGATCCAG ACCATATCCA TACACCAGGC ATCTATGTGG ATCGCCTGAT CCAAGGTACG
TTCGAGAAGC GTATCGAGCA GCGCACAGTG AAGAGCAAAT AG
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| Protein sequence | MAGLNKLVTS YEEALEGLTD NMTVMVGGFG LCGIPEGLIA QMVKSGAKGL TAISNNAGVD
DFGLGLLLKS RQISTMIASY VGENATFEQQ MLSGELNVIL TPQGTLAEKI RAGGAGIPAF
FTATGYGTPV AEGKETREID GRHYVLEPAL TADFALVRAW KADTMGNLVF RKTAANFNPM
MATAGKITVV EAEHIVEPGE LDPDHIHTPG IYVDRLIQGT FEKRIEQRTV KSK
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