Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2540 |
Symbol | |
ID | 4921155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2997531 |
End bp | 2997842 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640164134 |
Product | NIPSNAP family protein |
Protein accession | YP_001094665 |
Protein GI | 127513468 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGTAA CCTGTCACGT GAAATACATC ATCGACCCGG ATAAGCTGAA TAAGTTTGAG CACTATGCCA GACTCTGGCT ACCTTTGGTG GCCAAGTTTG GTGGGCAACA TCACGGCTAC TTCCTGCCCA GCGAGGGGGC CAACGATGTC GCCTTGGCGC TATTCAGCTT TCCGTCACTG GCCAGCTACG AGCAATACCG CGAGGCCTCA GTGCATGACA AAGAATGTAT CGCCGCCTTC GAGTACGCCA AGCAGCACAA GTTTATCCGC CGCTATGAGC GCAGCTTCAT GCGCCCGCTG CTGCCGGAAT AA
|
Protein sequence | MAVTCHVKYI IDPDKLNKFE HYARLWLPLV AKFGGQHHGY FLPSEGANDV ALALFSFPSL ASYEQYREAS VHDKECIAAF EYAKQHKFIR RYERSFMRPL LPE
|
| |