| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2412 |
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| Symbol | |
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| ID | 4921742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2833034 |
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| End bp | 2833558 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640164002 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001094537 |
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| Protein GI | 127513340 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0294882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAATG CAAGCAAGGT GATCATCGGG CTGCAAAACC CAAAGAGCCC GACGAACGTG
GGCGGCGTGA TGCGCGCCGC CGGCTGTTAT CGCGCCGATG AGGTGCGTTA CACGGGTAAA
CGTTATGCGC TGGCCGCCCA GCACAGGGGC GAGCAGTACA ATACCGACAC CAAGCGGGTG
AGTCAGCATA TTCCCCTCAA TGGCGTAGAG TCGCTGCTTG ACTCACTCGA TGCCGATACC
AAGGTGATCT GCGTCGATCT GGTGGAAGGC GCCACGCCGC TGCCGGCCTT TAGCCATCCG
CAGAAGGCCA TCTACCTATT CGGCCCCGAA GATGGCACTC TAGATCAGGC GCTTATCGAC
TGCGCCGATG AGGTTGTCTA TGTCCCGACC GTGGGCTGCA TGAATCTGGC CTCCTCGGTC
AATGTGCTGC TCTATGACAG GTTGGCCAAG GGAGAACATC TCTCGGGCGA TGACCTTATT
CGCGCCAGCC GTGACACCAA CAACCGCGTT AAGGTCAAAG CCTAA
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| Protein sequence | MANASKVIIG LQNPKSPTNV GGVMRAAGCY RADEVRYTGK RYALAAQHRG EQYNTDTKRV
SQHIPLNGVE SLLDSLDADT KVICVDLVEG ATPLPAFSHP QKAIYLFGPE DGTLDQALID
CADEVVYVPT VGCMNLASSV NVLLYDRLAK GEHLSGDDLI RASRDTNNRV KVKA
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