Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_2384 |
Symbol | |
ID | 4921448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 2790184 |
End bp | 2791251 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640163974 |
Product | O-methyltransferase family protein |
Protein accession | YP_001094509 |
Protein GI | 127513312 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00401072 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACTTTT ACCAATCGCC GAAACAGATA TCGGCATTTG ATGCCAAATT TGAAGCACAA AAAATCGCAT TCGCTCCAAT AACCTTCCAG GTTGCCCGTT GCCTGCTGAA ATTCGATCTA TTAGCCCAAA TCGAAGCTAA ACCTGGCTCG AGCCGCCCAC AGCTCGCGAG TCTGGTTGAT CTATCAGACT ATGCCGTCGG TGTCCTGCTG GATATGGCCC TGAGCATGGG ACTCGTCTGG CAAGATGATC AAGGCTTTCA CCTGGACAAG ATAGGCCACT TCCTGCTTCA CGATGAGATG TCCAGAGTCA ACCTTAACTT CAACCATGAC GTTTGTTATC AAGGGATGTT CGAGCTCGAC AAGGCATTGG AGAATGGCGA AGCCAGTGGT CTGAAGGTGT TTGGCGATTG GCAGACCATC TATCCTGGCC TAAGCCAGCT GCCACCGGCG GCCAAGCAGA GCTGGTTCGA ATTCGACCAC TTCTATTCCG ATCACGCCTT TGGCACTGTG CTGCCACTGA TCTTTAAGGC CGAGCCGAAG ACACTGGTGG ATATAGGTGG TAACACGGGA AAATGGGCAC TCGCCTGCAC CCGCTACGAT GCCGAGGTCG AAGTCACCAT CATGGATCTC CCGGGTCAGC TGAAGGTCGC CATGGAAAAT GCCAAAGACA AGGGCTTGAG TGACCGTATC CATGGCTTCG AATGCGATCT GTTAAAGGCA GATACGCCCT TCTTTAAGGG AGGGGATCTT TACTGGATGA GTCAGTTCTT AGATTGCTTC TCCGAGGAGC AGATACTGAC CATATTAAAA CTAGCCGCCG CCAATATGGC TTCCCATAGC GAACTCTGTA TCTTAGAGAC CTTCTGGGAC AGACAACCCT GCGAAGCCGG TGCCTATTGT GTCAATGCCA CCTCGCTCTA CTTCACTGCC ATGGCAAACG GCAATAGCCG CATGTACCAC TCGAAAGATC TGCTCAAGCT GATCTCATCG GCGGGCCTCT ATGTCGACGA GGATATCGAT AACATAGGAC TAGGTCATAC CTTGCTGCGC TGTCGTAGAA AGCCTTAA
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Protein sequence | MDFYQSPKQI SAFDAKFEAQ KIAFAPITFQ VARCLLKFDL LAQIEAKPGS SRPQLASLVD LSDYAVGVLL DMALSMGLVW QDDQGFHLDK IGHFLLHDEM SRVNLNFNHD VCYQGMFELD KALENGEASG LKVFGDWQTI YPGLSQLPPA AKQSWFEFDH FYSDHAFGTV LPLIFKAEPK TLVDIGGNTG KWALACTRYD AEVEVTIMDL PGQLKVAMEN AKDKGLSDRI HGFECDLLKA DTPFFKGGDL YWMSQFLDCF SEEQILTILK LAAANMASHS ELCILETFWD RQPCEAGAYC VNATSLYFTA MANGNSRMYH SKDLLKLISS AGLYVDEDID NIGLGHTLLR CRRKP
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