Gene Shew_2384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2384 
Symbol 
ID4921448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2790184 
End bp2791251 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content51% 
IMG OID640163974 
ProductO-methyltransferase family protein 
Protein accessionYP_001094509 
Protein GI127513312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00401072 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACTTTT ACCAATCGCC GAAACAGATA TCGGCATTTG ATGCCAAATT TGAAGCACAA 
AAAATCGCAT TCGCTCCAAT AACCTTCCAG GTTGCCCGTT GCCTGCTGAA ATTCGATCTA
TTAGCCCAAA TCGAAGCTAA ACCTGGCTCG AGCCGCCCAC AGCTCGCGAG TCTGGTTGAT
CTATCAGACT ATGCCGTCGG TGTCCTGCTG GATATGGCCC TGAGCATGGG ACTCGTCTGG
CAAGATGATC AAGGCTTTCA CCTGGACAAG ATAGGCCACT TCCTGCTTCA CGATGAGATG
TCCAGAGTCA ACCTTAACTT CAACCATGAC GTTTGTTATC AAGGGATGTT CGAGCTCGAC
AAGGCATTGG AGAATGGCGA AGCCAGTGGT CTGAAGGTGT TTGGCGATTG GCAGACCATC
TATCCTGGCC TAAGCCAGCT GCCACCGGCG GCCAAGCAGA GCTGGTTCGA ATTCGACCAC
TTCTATTCCG ATCACGCCTT TGGCACTGTG CTGCCACTGA TCTTTAAGGC CGAGCCGAAG
ACACTGGTGG ATATAGGTGG TAACACGGGA AAATGGGCAC TCGCCTGCAC CCGCTACGAT
GCCGAGGTCG AAGTCACCAT CATGGATCTC CCGGGTCAGC TGAAGGTCGC CATGGAAAAT
GCCAAAGACA AGGGCTTGAG TGACCGTATC CATGGCTTCG AATGCGATCT GTTAAAGGCA
GATACGCCCT TCTTTAAGGG AGGGGATCTT TACTGGATGA GTCAGTTCTT AGATTGCTTC
TCCGAGGAGC AGATACTGAC CATATTAAAA CTAGCCGCCG CCAATATGGC TTCCCATAGC
GAACTCTGTA TCTTAGAGAC CTTCTGGGAC AGACAACCCT GCGAAGCCGG TGCCTATTGT
GTCAATGCCA CCTCGCTCTA CTTCACTGCC ATGGCAAACG GCAATAGCCG CATGTACCAC
TCGAAAGATC TGCTCAAGCT GATCTCATCG GCGGGCCTCT ATGTCGACGA GGATATCGAT
AACATAGGAC TAGGTCATAC CTTGCTGCGC TGTCGTAGAA AGCCTTAA
 
Protein sequence
MDFYQSPKQI SAFDAKFEAQ KIAFAPITFQ VARCLLKFDL LAQIEAKPGS SRPQLASLVD 
LSDYAVGVLL DMALSMGLVW QDDQGFHLDK IGHFLLHDEM SRVNLNFNHD VCYQGMFELD
KALENGEASG LKVFGDWQTI YPGLSQLPPA AKQSWFEFDH FYSDHAFGTV LPLIFKAEPK
TLVDIGGNTG KWALACTRYD AEVEVTIMDL PGQLKVAMEN AKDKGLSDRI HGFECDLLKA
DTPFFKGGDL YWMSQFLDCF SEEQILTILK LAAANMASHS ELCILETFWD RQPCEAGAYC
VNATSLYFTA MANGNSRMYH SKDLLKLISS AGLYVDEDID NIGLGHTLLR CRRKP