| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2345 |
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| Symbol | |
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| ID | 4922072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2739163 |
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| End bp | 2740677 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640163930 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001094470 |
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| Protein GI | 127513273 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGT TTGTCGGTCC CTGGCAGCGG CTGACATTGG GCCTCTGGCT GCTGGTGGCG
ATCAGTCTGC TGTTTGTCGA TATTGAGATC ATCAGTCTGG ATCCCTGGGG GGAACTGCTG
CGCATGGGGC AGGGGCTGCT GATGCCAGAT TTCTTCGCCA CCGAGTCGCT GGTCAATGCC
CTGTGGCAGA CGGTGAGCTT TGCACTGCTC GGGGTCAGCT TCGGCCTGCT GCTAGGCTCC
CCCTTGGCAC TGGTTTATCG CTCGCCCTGG ATAGCAGGGA TCTGCGCCAT GGTGCGGGGG
ATCCATGAGA TCTTCTGGGC GCTGCTCTTT CTGCAAGTCT TTGGCCTGTC GCCGGTGACG
GGTGTGCTGG CGATCGCCTT ACCCTATGGC GCCACCTTTG CAAGGGTGTT TCATGACATA
CTGCAGCAGG CACCCAGTAA CACCAATGAC ACCTTGCCTT TTGGTTGCGA CAGGCTAAGC
GCCTACTTCT ACGGTAAGCT TGGCCATGTG CTGCCTTTGA TGCTGGCCTA TGTGCGCTAC
CGGTTCGAGT GTGCCCTGCG CAGCAGCGCA GTGCTTGGCT TCATCGGCAT GCCGACCCTG
GGTTTCTACT TGGAGACAGC CTTTCGTCAG GGTAAGTATC ATGAGGGGGC TGCGCTGCTC
ATCCTCTTCG TGGTCCTGAT TGGCACTATC CCGCTCTGGT CACGCAGGCG TCTGTTGCCG
CTCTATCTGT TGGCGGCGCT ATTTACCCTG CCTAAGCTGA CCAGCGTGGA TCTGCAGCTG
GTTTGGCAGT TCTTAACTGT GGATATTCTG CCTCCGGGGA TCCGCGAGGT GATCTATGGG
CAGCAAGAGT TTGCCCAGGG ACTGTCGCGA TTTGCCAGCT GGTGGCAGCG CATGACGCTG
GAGCAGGCCT TACCCGGCGT GGGGGCCACC TTAGTGCTGG CGATAAGCGC ACTTGGCTTG
ACCCATCTGC TGGCACTTTT CGGCCATCGT TTTGCCAGCA TGCATAGCCG CGGCAAGTTT
TCTATGCCCA TAGGGCAACT CTTGTTGCTG ATCCTGCGCT CCATGCCAGA GTATATTCTG
GCGTTCATCT TCATGATGCT CTGTGGCCCT TCCATGTTGC CCGCCATCTT GGCTTTGGGG
CTGCACAACG GCTCCCTGAT CGCCTACCTG CTGACGCGCC AGGACAGCCT GGTCAAACCC
AGCGCCCTGT ACCAGCGCCG CAGCGACCAC TATGGTTATG AGGTGTTGCC GCGCATCTAT
CCCAACCTGA TGTCGCTGCT CTTCTATCGT TTCGAGGTGA TACTGCGGGA GACCGCCATC
TTTGGCGTGC TGGGGGTGAT GACGCTAGGC TTCTATATCG ATAGCGCCTT TAGCGAGATA
CGTTACAACA ACGCCTTCTA TCTGCTTATC GTGACCGCGT TACTCAACGT GCTGGTGGAT
AGCCTGGCGC GGCGAATGCT GGCCAAGCGC CTGAATCAAG GGATGGCGGT CGGCCAGGTA
TCTTGCGTGG TCTAA
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| Protein sequence | MFKFVGPWQR LTLGLWLLVA ISLLFVDIEI ISLDPWGELL RMGQGLLMPD FFATESLVNA
LWQTVSFALL GVSFGLLLGS PLALVYRSPW IAGICAMVRG IHEIFWALLF LQVFGLSPVT
GVLAIALPYG ATFARVFHDI LQQAPSNTND TLPFGCDRLS AYFYGKLGHV LPLMLAYVRY
RFECALRSSA VLGFIGMPTL GFYLETAFRQ GKYHEGAALL ILFVVLIGTI PLWSRRRLLP
LYLLAALFTL PKLTSVDLQL VWQFLTVDIL PPGIREVIYG QQEFAQGLSR FASWWQRMTL
EQALPGVGAT LVLAISALGL THLLALFGHR FASMHSRGKF SMPIGQLLLL ILRSMPEYIL
AFIFMMLCGP SMLPAILALG LHNGSLIAYL LTRQDSLVKP SALYQRRSDH YGYEVLPRIY
PNLMSLLFYR FEVILRETAI FGVLGVMTLG FYIDSAFSEI RYNNAFYLLI VTALLNVLVD
SLARRMLAKR LNQGMAVGQV SCVV
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