| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2268 |
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| Symbol | |
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| ID | 4922623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2647733 |
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| End bp | 2648830 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640163853 |
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| Product | hypothetical protein |
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| Protein accession | YP_001094393 |
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| Protein GI | 127513196 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.33229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACATC ACATCGAAGA TCTGCTCAAC GCCTGGTCGG CGGCGCCCCA AGATGATTGG
GTGCTGGCCG TGGTGACCCA TGTGGAGGGC TCGGCCTATC GCAAGGTGGG CGCCATGATG
CTGATCCACG GTATGGGTAA GAGTGTCGGC CTGGTGAGCG GCGGCTGCTT GGAGGCCGAC
CTGCGCCGCC GGGCCCAGAA GGTGATCCAG ACCGGGCAGG CCGCCAGCGT CTGTTACGAT
GCCACCGACG AGGCCGATGC CAGCTATCAG CTGGGCTGTG GCGGACTCGT TCATCTCATG
CTGCTGCCCC TGTGCGCCGC CAATCACTAT CTGCACTTTC AGGCGCTCAA GGCTGCGCTC
GCCAGCCAGG GGCGATGCCA TTATCAGTTA ATGCTCACCG ATGAATCATT ATCGCCCGGT
TCCCTTGGCG CTAAGGTGTG GACCAGCCAG CAGGCCCTGG ATGATGCCAA GGCGGGCTGG
CAACTGAGCG ATTTTCCCCG CCCGGGCATC TTACAGGGCC AGTCAATGCA GGGCGAAACG
GTGCGAGGCC AATCTTTGCA AGATGAGTCG GTGCAAGGTG AGTCTGCGAG TTTAGTCGTT
CCCCTGCGTG AGCATCATCG CATCGCTATC TTCGGCGGCG GCCTGGATGC CCAGCCCGTG
TGTCAGATTG CCCAGCAGCT GGGTTGGCGA GTGGATGTGG TCGACCGTCG CACCAGCTAT
GCAAGGGAGT ATGATTTTGT CGGCGCCAAC ATCATCAAGC TGCCGGTTAG TGAGCTGCCC
AAGAATTTCT GGACCCGTCT CGATGGCGCC ATCGTCATGC AACACAACCT GGAGTTGGAT
GCCAAGGCCC TGGCGGCAAT TCATCAACAC GCAAAGCAGC TTAGCTACCT GGCGCTGTTG
GGCCCTGGCC ATAGGCGTGA CAGGGTGCTG GCCCTTGCCG GGCTCGAGGT CGCAAGCTTT
GGTGCCTATT TCTCGGCGCC GGCCGGCCTG GCGTTAGGGG GCGAGCTGCC ATCCTCGATA
GCCCTCTCCA TATTGTCCGA ATGTCACGGC GTGCTGCACG GCGCCAAGCG GGTCGCCCTT
AAAGAGGTGA TGGCGTGA
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| Protein sequence | MSHHIEDLLN AWSAAPQDDW VLAVVTHVEG SAYRKVGAMM LIHGMGKSVG LVSGGCLEAD
LRRRAQKVIQ TGQAASVCYD ATDEADASYQ LGCGGLVHLM LLPLCAANHY LHFQALKAAL
ASQGRCHYQL MLTDESLSPG SLGAKVWTSQ QALDDAKAGW QLSDFPRPGI LQGQSMQGET
VRGQSLQDES VQGESASLVV PLREHHRIAI FGGGLDAQPV CQIAQQLGWR VDVVDRRTSY
AREYDFVGAN IIKLPVSELP KNFWTRLDGA IVMQHNLELD AKALAAIHQH AKQLSYLALL
GPGHRRDRVL ALAGLEVASF GAYFSAPAGL ALGGELPSSI ALSILSECHG VLHGAKRVAL
KEVMA
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