| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2153 |
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| Symbol | |
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| ID | 4923325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2497592 |
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| End bp | 2498497 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163738 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001094278 |
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| Protein GI | 127513081 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.638305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG ATGTGGAAGC CTTTAGGGTG TTGTCGATTC TGGTGGAAGA GGGCAGTTTC
TCCAAGGCTG CCGAGCGATT GCACAAGGCG CAGTCGGCGG TGAGCTATCA GGTGAAGAAG
CTGGAACAGC ACCTGGGTGT AAAGCTTTTT TGTCGGGATC AGTATCGCGC CGAATTAACC
CCTGAGGGTA AGGTGATCCT CGCCGAAGGT AAACGCTTGC TGCAATACCT TGGCAACATT
GAACATTTAG CCAGCCGTTT CAGCGAAGGC TGGGAGCCTA AACTTGAGTT GGTGGTGGAT
GGCTCACTGC CCATGGAGCC CATCATGCGG GCGCTGAAGC GGGTGTCTGA GCATAAGATC
CCTACTAAGA TCCAGCTCAA CATGGAGTTT CTCGGTGGGG TACAACACAG GTTCGAGCGG
GATAATGCCG ATCTCATGTT GGTGAAAGAC TATCGCACCG GGCCTAACTA TCGGCCACAG
CCTCTGCCCG ACATCAACAG CATACTGGTG GTGAGTCGCT CTCACCCCTT AGCCAAGGCC
AAGGAGCTCA GCCTGTTTGA GTTGCTACAG CATGTGGAGC TGACCATCGA GGATTCCTCG
CCTGGCAAGA TCCACAGCGA CGAGCTGCAA TTTGGCGGTG ACAAGGTGTT TTACCTGTCT
GGCTTTATCA TGAAGAAGAA TGCCCTGCTG ATGGGACTGG GCTTTGGCTG GATGCCTGAC
TTTTTGATTC AAGAGGAGCT GGCCAGCGGT GAGTTACAGG AACTGGATTT TCTCGGTGGC
AGTCGTTACA GCTTTACCCC TCAGTTGGTA TCGACCATGG AGCGCCCCTT AGGTCGCGCC
GGCCGGCTCT TTACCAGCCT GATCCTGGAG GAGTTTAACC TTTACCAAGC CCAGGCCAGT
CGTTAA
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| Protein sequence | MKIDVEAFRV LSILVEEGSF SKAAERLHKA QSAVSYQVKK LEQHLGVKLF CRDQYRAELT
PEGKVILAEG KRLLQYLGNI EHLASRFSEG WEPKLELVVD GSLPMEPIMR ALKRVSEHKI
PTKIQLNMEF LGGVQHRFER DNADLMLVKD YRTGPNYRPQ PLPDINSILV VSRSHPLAKA
KELSLFELLQ HVELTIEDSS PGKIHSDELQ FGGDKVFYLS GFIMKKNALL MGLGFGWMPD
FLIQEELASG ELQELDFLGG SRYSFTPQLV STMERPLGRA GRLFTSLILE EFNLYQAQAS
R
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