| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2149 |
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| Symbol | |
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| ID | 4923321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 2495069 |
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| End bp | 2495929 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640163734 |
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| Product | ABC transporter |
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| Protein accession | YP_001094274 |
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| Protein GI | 127513077 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACAG GCGGCTTTAA CTTAAGCATA AATAGCGCTA ATAGGCAGGC CTTGCTCTCT
ACGCCGCTAT TGCCAGTACC GCCATTGCCA GTAAAGCTAT GGCCAGCAAC GCTACGACGC
GTCCATTTAC TGTGTGTCTT CATCTTCATC GCTACCTTGT TGTGTGTTGT TTCAGCCCCG
AAGGCCGAGA CCCTCAAGCT TTCCTCATTA AATTGGCCAC CCTATTCGGG GCCGACGCTG
AAGGATGGCG GCGCCTGTGT GGTGGTGGCC AGAGCCGCAC TTGCAGCCAT GGGTCATGAG
CTTCAGGTGG ACTATTTCCC CTGGAGCCGC ACAGTGCGTG TGGTGACCCG GGACGACTCT
GGCTATCAGG GCTATTTCCC CGAGTATCAT CACCCAACCG ATAAATTCAT CTTCTCCGAC
TCCATGGGAC AGAGTCCCCT TGGGATCTTG GAGCAGAGCC AGCACCCCAT TACCTGGTCG
CGAGTGCAGG ATCTCAATGC CTACACCTTG GGCGTGGTCA GAGACTATGT GAACACCCAG
GCGCTCGATG AAATGATTGC CATCGGCGCC CAGCCGGTAG AGCTGGTGAG CTCAGATGAG
CACAATATCC GCAAGGTGGC CACTGGAAGG GTTCAGGGCG CCGTCATGGA TCTCTATGTT
TATCAGTTTC TCATCGAGCA GCCACACCTG AGCGAACTCA AGACCAGGCT GCAATTTAAC
AAGCAGTTAC TGGAGTCGAA ACAGCTCTAT ATCGCCTTTA GAAACACTCC CGATGGACGC
AGGTGGCGAG AGATCTATAA CGCCGGCCTG GCCCGTATCC AAGTCGAGCA GCTCCTCGAA
GATTACCTTC AAAGCCTCTA A
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| Protein sequence | MRTGGFNLSI NSANRQALLS TPLLPVPPLP VKLWPATLRR VHLLCVFIFI ATLLCVVSAP
KAETLKLSSL NWPPYSGPTL KDGGACVVVA RAALAAMGHE LQVDYFPWSR TVRVVTRDDS
GYQGYFPEYH HPTDKFIFSD SMGQSPLGIL EQSQHPITWS RVQDLNAYTL GVVRDYVNTQ
ALDEMIAIGA QPVELVSSDE HNIRKVATGR VQGAVMDLYV YQFLIEQPHL SELKTRLQFN
KQLLESKQLY IAFRNTPDGR RWREIYNAGL ARIQVEQLLE DYLQSL
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